Panthera uncia (snow leopard): 125935470
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Entry
125935470 CDS
T08832
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03440
Homologous recombination
puc03450
Non-homologous end-joining
puc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125935470
03450 Non-homologous end-joining
125935470
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125935470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puc03032
]
125935470
03400 DNA repair and recombination proteins [BR:
puc03400
]
125935470
DNA replication proteins [BR:
puc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125935470
DNA repair and recombination proteins [BR:
puc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125935470
BRCA1-C complex
125935470
NHEJ (non-homologous end-joining)
MRX complex
125935470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
125935470
NCBI-ProteinID:
XP_049505098
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All DBs
Position
A1
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEKETEIANQMMNDFAE
KETMKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKSDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLGRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKTNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggattgaaaagatgagcattctgggtgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacgctgcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaacaaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaatatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctttctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
cagatggaaaaagataatagtgaactggaacagaagatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtgagggagaaagaaagg
agactgatagactgtcagcgtgaactggaaaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttgttgaacagggtcgtctacagctacaagcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttagcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagagacaagagaaggaaacagaaattgccaaccaaatgatgaatgactttgcagaa
aaagagactatgaaacaaaaacagattgatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagccttcaaagtgagaaagcagacctagacaggaccctgcgtaaa
ttggaccaagagatggaacagataaaccatcatacgacaacacgtacccagatggagatg
ctgaccaaagacaaatctgacaaagatgaacaaatcagaaagataaaatctcgacacagt
gatgaattaacttcattgttagggtattttcccaacaaaaagcagcttgaagactggctt
catagtaagtcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatttaaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagccacggcagtttactcccagttcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttacagtctaagctgcggcttgctccagataaactcaagtcaacagaatcggaactaaag
aaaaaagaaaaacggcgtgatgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcaaaatgtcaacagagac
atacagcgcttaaagaatgacatagaagaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtatgcctgacagatgttacaattatggaaagattccagatg
gaacttaaagatgttgaaagaaaaatcgcacagcaagcagctaagctgcaaggactagac
ttgggtagaactgtccagcaagtaaaccaggagaaacaagaaaaacaacacaagttagat
acagtttccagcaagattgaattgaatcgtaagcttatacaggaccagcaagaacagatt
caacacttaaagagtacaacaaatgaactgaagtcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttagaaacaacattggag
aagttccagcaggaaaaagaagaattaatcaataaaaaaaatgcaagcaacaaaatagca
caggataaaacgaatgatatcaaagagaaagttaaaaatattcatggttatatgaaggac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtgatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagag
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctacaagat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggtcttacaaatgaaaaatgaacatcagaaattg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattatacattttaagagagaacttcgagaacctcaatttcgggatgcg
gaggaaaagtacagggaaatgatgattgtcatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacagaaggtattagcctcactcatcattcgtctggccctggctgaaaca
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgacagagaa
aatattgaatctcttgcacatgctctcgttgagataataaagagtcgctcgcagcagcgt
aacttccagcttctggtaatcactcacgatgaggattttgtggagctcttagggcgttct
aaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
acatgtagtgttagctctctaggttcttatgttcattaa
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integrated database retrieval system
