Panthera uncia (snow leopard): 125936411
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Entry
125936411 CDS
T08832
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125936411
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
DUF4959
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125936411
NCBI-ProteinID:
XP_049506423
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Position
A3
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AA seq
1284 aa
AA seq
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MVHDLVSHRRCATSALVCPHLGVCLWLWLGVAVGLGQRQESGRLRLAVLPEDRLQMKWSE
PEGSSLGYLVQVKPMAGDAEQDVMLTTKAPKATVGGLSPSKGYTAQIFRLTGSGTTLLAQ
REFVIEELKRPLGAALEPTPSHVGSPAPEPPVASSPSQDPPTLASPQFRCTPPTPVDMIF
LVDGSWSIGHSQFQQVKDFLASVIEPFDIGPDKVQVGLTQYSGDPQTEWDLSTFGAKEDV
LAAVRSLRYKGGNTFTGLALSHVLEQNLRPGAGSRPEAATAVILVTDGKSQDDARAAGRA
LKDLGVDIFAVGVKNADEAELQLLASRPLDITVHNVQDFPQLGTLAGLLSRLICQKVQGR
SRAPGDPSSPDTLFTPTSLVVTQVTSSSVHLSWTPAPQLPLKYRIVWQPSRGGAPREVVV
EGPASSTELHNLTAGTQYLVSVLPVLRAGFGEGLRRLVTTAPLPPPQALALAAVTPRTIR
LTWQPSAGATRYLVRCLSASAKGQEEGREVRVGQPEVLLDGLEPGRDYDVWVQSLRGAEA
SEARGIRARTSTLAPPGHLSFSDVSHDSARVSWEGVSKPVRLFRISFASSDSSHSGEVEA
PGNATSATVGPLSSSTAYSVRVTCLYPGGSSSVLTGCLTTRKVPSPSQLSVTELPGDEVR
LEWTAAAASGVLVYQIKWTPLGDGKAHEISVPGHRDVAVLPGLRSHLEYEITILAYYRDG
ARSDPVSLRYTPPHRSPPSDLALASKSPDSLQVSWTPPSGHVLHYRLTYVPASGSGPEKS
ISVPGLSNHVTLPNLLAASKYRVLVSAVYGAGESRPVSAIGHTACPALSPDGSLSGFDLM
AAFGLVEKEYASIRGVAMEPSAFGRARTFTLFKDAQLTRRASDVHLAALPPEHTVVFLLR
LLPETPRETFALWQMTAEHSQPVLGVLLDAGRKSLTYFNHDPRATLQEVTFDLPEVRRIF
FGSFHKVHVAVGRSKVRLYVDCRKVAERPMGEAGSPPVTGFVMLGRLAKARGPRSSSATF
QLQTLQIVCNDSWAEEDMCCELPASKDGESCPAFSSSCACCSQTPGPPGPQGPPGLPGRN
GVPGERGFPGPRGPPGVKGEKGDHGAPGLQGHPGHQGPPGKVGLQGPKGMRGLEGSAGLP
GPPGPRGFQGTAGARGSGGQRGLPGPVGLTGLPGPKGERGEKGGPQSLATIYQLVNQACE
SAIQTHGLEFHHESVRAPRPILQALGHPSSHGEAWLPGRGGRDGPHPEDGGEPGALGQRS
SPRLKGSEPPGPLGGTGRPPCCPE
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggtccacgacctcgtctcccacaggcggtgcgccacgagtgcccttgtgtgcccccac
ctcggggtctgcctctggctgtggctgggtgttgccgtgggactcggccagagacaagag
agcggccgcctgaggctggcggtgctgcctgaggaccggctgcagatgaagtggtcagag
ccggaggggagcagccttggctacctggtgcaggtgaagcccatggcaggggacgcggag
caggacgtgatgctgaccacgaaggcccccaaggccacggtggggggcctgagcccctcc
aagggctacaccgcgcagatcttccggcttactggctcagggaccaccctgctggcgcag
agggagtttgtgatagaggagctgaagaggcccctgggggcagccctggagcccacgccc
tcccacgtggggagcccagccccagagcccccagtcgcctcgtccccgagccaagacccg
cccactcttgccagcccccagttccgctgcacaccccctacgcctgtggacatgatcttc
ctggtggacgggtcctggagtatcggccacagccagttccagcaggtcaaagatttcctg
gccagcgtcatcgagccctttgacatcgggccggataaagtccaagtcggcctgactcag
tacagtggagacccccagactgagtgggatctcagcaccttcggcgccaaggaggacgtg
ctggccgctgtccgcagcctccgctacaaagggggaaacacgttcacaggcctggccctg
tcacacgtgctggagcagaacctgcggccgggggcgggttcccgtccagaggcggccacg
gcggtgattctggtgacggacggcaagtcccaagatgatgcccgtgccgctggccgtgcc
ctcaaggacctgggtgttgacatctttgctgtgggcgtgaagaacgcggacgaggccgag
ttacagctcctggcgtcccggccgctggacatcaccgtccacaatgtgcaggactttccc
cagctgggcaccttggccggcttgctcagccgcctcatctgccagaaggtccagggcagg
agcagggccccgggtgacccctcctccccggacaccctcttcactcccaccagcctggtc
gtgacccaggtgacctcctccagcgtccacctgtcctggactccagccccccagctgccc
ctcaagtatcggatcgtgtggcagccttccaggggtggcgcccccagggaggttgtggtg
gaggggcccgcctcgtccacggagcttcacaacctgacggccggcacgcagtacttggtg
tctgtgctccctgtcctccgggctgggttcggagagggcctgaggcgcctcgtgaccaca
gcgcctctccctccgccccaggcgctggccctggccgcagtgacacccaggaccatccgc
ctcacctggcagccgtcggccggggccacacggtacctggtgcggtgcctgtcggcctcc
gccaagggccaagaggaggggagagaggtgcgggtggggcagcccgaggtgctgctggac
ggcctggagcccggcagggactatgatgtctgggtacagagcctgcgaggggccgaggcc
agcgaggctcggggcatccgtgccaggacctccaccctcgcgccccccggacacctcagc
ttctcagatgtgagtcacgactcagcccgtgtttcctgggagggcgtctcgaagcccgtg
cgtctgttcaggatcagctttgcctccagtgacagcagccattcaggggaggtggaggct
cccggcaacgccacctcggccaccgtgggccctctgtcctcctccactgcatattctgtc
cgcgtcacctgcctctaccccgggggcagttcttccgtgctgaccggctgcctgactacg
cggaaagtccccagcccgagccagctctcggtgacagagctccctggggacgaggttcga
ctggagtggacggccgcagcggcttccggcgtccttgtgtaccagatcaagtggacgccc
ctgggagacgggaaggcccacgagatctctgtcccagggcaccgggacgtggcagtcctg
cctggcctgcgaagccacttggagtacgagatcaccatcctggcctactacagggacggg
gcccgcagcgacccggtgtccctccgctacacccccccgcaccggagcccgccctctgac
ctggccctggcgtccaagtcacccgacagcctgcaagtcagctggacccctccgagcggc
cacgtcctccattaccggctcacctacgtgccagcctcgggctcggggcccgagaagtcg
atctctgttccaggactcagcaatcacgtgacgctccccaacctgctggcggccagcaag
tacagggtcctggtctccgcagtctatggagcgggagagagcaggcctgtgtctgccata
ggccacacggcctgccccgccctcagcccagatggctccctctcaggctttgacctcatg
gcggcctttggtctggtggaaaaggagtatgcgtctatccgcggcgtcgccatggagccc
tcggcattcggccgcgccaggaccttcacactcttcaaggatgcccagctgacgcgccgg
gccagtgacgtccacctggccgccctcccaccggaacacacggttgtcttcctcctgcgt
ctgctgcccgagacaccccgcgagacctttgcgctgtggcagatgacggccgagcactcc
cagcccgtcctgggggtcttgctggatgccggcaggaagtctctgacctacttcaaccac
gaccccagggctaccttgcaagaggtcacctttgacctgcccgaagtgaggaggatattc
tttggaagcttccacaaggtgcatgtggctgtgggccgctccaaggtcaggctctatgtg
gactgccggaaggtggctgagaggcccatgggggaggcaggcagcccacctgttactggc
ttcgtcatgctgggacggttggccaaggcccgtgggccccggagcagttcagccacgttc
cagctccagacgctgcagatcgtgtgcaatgactcctgggcggaggaagacatgtgctgt
gagctccctgcgtcgaaggatggagagagctgccctgccttctcttcctcttgtgcctgt
tgctcgcagaccccggggcccccggggccccagggacctccgggcctccccggaaggaac
ggagtcccaggagaacggggcttcccaggccccaggggtccgccaggggtcaaaggagag
aagggggaccacggagccccgggtttgcagggccatcctggtcaccagggccctcccggg
aaggtcggcctccagggacctaagggaatgaggggtctggaggggagtgctggcctgcct
ggacctccgggcccgaggggcttccagggcacggcgggggccaggggctccggagggcag
agaggactcccggggcctgtggggctcacggggctgccggggcccaaaggggagcgagga
gagaagggggggccgcagtccctggccaccatctaccagctcgtgaaccaggcctgcgag
tctgccatccagactcacgggctggagttccaccatgagagcgtcagggcccccaggccc
atcttgcaggccctcggacaccccagctctcacggtgaggcctggctccctggaagagga
ggacgagacggcccccaccctgaggacggaggtgagcccggagcccttggtcagaggagc
agccctcggctgaaagggagtgagcctcccggacccctggggggaacaggacggcccccg
tgctgcccggagtga
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