Panthera uncia (snow leopard): 125936771
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Entry
125936771 CDS
T08832
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04140
Autophagy - animal
puc04148
Efferocytosis
puc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125936771
04148 Efferocytosis
125936771
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125936771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125936771
Membrane trafficking [BR:
puc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125936771
Hops complex
125936771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
125936771
NCBI-ProteinID:
XP_049507019
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Position
A3
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AA seq
902 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGGVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVSDLKLRRMPEVPGLQGAPSCW
TALCQDRVAHILLAVGPDLYLLDQSACSAVTPSGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRYSKPQDSGRRAVCGQASQPLLDSC
GHCSSPVSLGSGRPELQAGVRLPSLSHLTLVPFTPSPARLVLRRLYPLAIQICEYLRLPE
VQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIK
LLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQ
PMALSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADA
FYKAKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLAR
DFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYAS
RVGPEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQ
KK
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcagggattgcctggtagctgct
gcgccctacgggggccccattgcactgttgaggaacccatggcggaaggagaaggctgcc
agcgtacggccagtgcttgagatctattctgcttccggcctgcctctggccagtctgctg
tggaagagtgggcccgtggtgtccctaggctggtcagctgaagaggagctgctctgcgtg
caggaggatggtggagtgctggtgtacgggcttcacggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggacgcccggatcttccatactgagttt
ggttcaggggtggccatcctcactggggcccaccgctttactctcagtgccaatgtcagt
gacctcaaactccgccggatgccagaggtgccaggtctgcagggtgcaccttcgtgctgg
accgccctctgccaggaccgagttgcacacattcttctggctgtggggcctgatctttac
ctcctggaccagtccgcctgctccgcagtgacaccctctggcctggcgccaggagtgagc
agcttcctgcagatggctgtctccttcacctaccgacacctggcactcttcacggacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgtaac
atccgggcccccccgaagcagatggtctggtgcagccgccctcgcagcaaagagagggcc
gttgtggtggcctgggagaggcggctaatggtggtgggcgatgcccccgagagcatccag
tttgtgctggacgaagactcctatttggttcctgagctggatggggtccgcatcttctct
cgtagcacccacgagttcctacatgaggttccagtggccagcgaggagatcttcaaaatt
gcctcgatggcccctggagcactgttgttggaggcccagaaagagtatgagaaagagagc
cagaaggcagacgagtacctacgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggccgcgggacatgagcaccggccagacatgcagaagagcctgctc
agggcggcctcctttgggaagtgtttcctcgacagatttccacctgacagcttcgtgcgc
atgtgtcaggacctgcgtgtgctcaatgccattcgggactatcacatcgggatccccctc
acttatagccaatataagcaactcaccatccaggtgctgctggacaggtacagcaaaccc
caggattctgggaggagggctgtatgtgggcaggcgtcacagcccctgctggattcttgt
ggtcactgttcctcacctgtttctctgggatctgggaggcctgagttacaggctggggtc
aggctgccctctctatcccacctcactcttgtaccctttaccccctcgcctgccaggctt
gtgttacgaaggctttaccccctggcgatccagatttgtgagtacctgcgccttcctgaa
gtgcagggcgtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggac
gtgtccgacgaggatgttgctcgagccattaaccagaagctgggggacacgcctggcgtc
tcttactctgacattgctgcgcgggcctatggctgtggccgcacagagctggccatcaag
ctgctggagtatgaaccacgctctggggagcaggtaccccttctcctaaagatgaagagg
agcaaactggcgctgagcaaggccattgagagtggggacactgatctggtgttcacggtg
ttgctgcacctgaagaatgagctaaatcgaggagattttttcatgactcttcggaaccag
cccatggccctgagtttgtaccgacagttctgtaaacatcaggagctagagacgctgaag
gacctctacaatcaggatgacaaccaccaggagctgggcagcttccacatccgagccagc
tatgctgcagaggagcgtatcgaggggcgggttgcagctttgcagacagcagctgacgcc
ttctacaaagccaagaacgagttcgcagccaaggccacagaggatcaaatgagactccta
cggctgcagcgacgcctagaagatgagttggggggccggttcctggacttgtctctacac
gacacggtcactaccctcatccttggaggccacaacaagcgcgcagagcagctggcacgt
gacttccgcattcctgacaagaggctctggtggctgaagctgactgccctggccgatctg
gaagactgggaggagctagagaagttttcaaagagcaagaaatcacccattggctacctg
ccctttgttgagatctgcatgaagcaacacaacaaatatgaggccaagaagtatgcctcc
cgtgtgggtccggagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggcc
gcagatgtggccatcgagcacaggaacgaagcagagctgagccttgtattatcccactgc
actggagccacagatggggccacggccgacaaaattcagcgggctagggcacaagcccag
aagaagtga
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