KEGG   Panthera uncia (snow leopard): 125937345
Entry
125937345         CDS       T08832                                 
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc04512  ECM-receptor interaction
puc04514  Cell adhesion molecule (CAM) interaction
puc04820  Cytoskeleton in muscle cells
puc05144  Malaria
puc05205  Proteoglycans in cancer
puc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:puc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125937345
   04514 Cell adhesion molecule (CAM) interaction
    125937345
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125937345
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    125937345
  09174 Infectious disease: parasitic
   05144 Malaria
    125937345
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    125937345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:puc04131]
    125937345
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:puc04090]
    125937345
   00535 Proteoglycans [BR:puc00535]
    125937345
Membrane trafficking [BR:puc04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    125937345
CD molecules [BR:puc04090]
 Proteins
  125937345
Proteoglycans [BR:puc00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   125937345
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 125937345
NCBI-ProteinID: XP_049507958
LinkDB
Position
A3
AA seq 310 aa
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGALQDLTLSQQ
PSSTWKGTEFLTAVPTAPEPSGTDNTATSTSILPAGERPEDREAVLPAEVEPGFTAREKE
TTHPPGETTPPPTTHQASTARATTAQGPVTSHPHRDMQPDHHETSAPAGPSQLDSHAPSV
EDRGPSATEKAAEDGVSTQLPAGEGSGEQDFTFDISGENTAVAAVEPDQRNQPPVDRGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPSKQEEFYA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaggcgcgctgcgctctggctctggctctgcgcgctggcgctgcgcctgcagccagct
ctcccgcaaatagtggccacaaatgtgccccctgaagatcaggatggctctggggatgac
tctgacaacttctctggctcaggtgcaggtgctctgcaagatctcaccttgtcacagcag
ccctcatccacctggaagggcacggagttcctgacggccgtgcccacagccccagagccc
agcggcacagataacaccgccacctccacgtccatcctgccggctggagagaggcctgag
gacagagaggcagtgctcccggcagaggtggagcctggcttcacggccagggagaaggag
accacccacccacccggcgagaccacgccaccgccgaccactcaccaggcatcaacagca
agagccaccacggcccaggggcctgtcacctcccatccccacagggacatgcagcctgac
caccatgagacctcagctcctgcaggacccagccagctcgactctcacgcgcccagcgtg
gaggaccgtggtccttctgccactgagaaggctgctgaggatggggtctccactcagctc
ccagcaggagagggctctggggagcaggacttcacctttgacatatctggggagaacaca
gccgtggccgctgtggagcccgaccagcggaatcagcccccagtggaccgtggggccacg
ggggcctcccagggcctcctggaccggaaggaagtgctgggaggggtcatcgctggaggc
ctcgtggggctcatcttcgccgtgtgcctggtgggtttcatgctgtaccggatgaagaag
aaggacgagggcagctactccttggaggagccgaaacaagccaatggcggggcctaccag
aagcccagcaaacaggaggagttctacgcctga

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