Panthera uncia (snow leopard): 125938088
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Entry
125938088 CDS
T08832
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04120
Ubiquitin mediated proteolysis
puc04137
Mitophagy - animal
puc04141
Protein processing in endoplasmic reticulum
puc05012
Parkinson disease
puc05014
Amyotrophic lateral sclerosis
puc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125938088
04120 Ubiquitin mediated proteolysis
125938088
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125938088
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
125938088
05014 Amyotrophic lateral sclerosis
125938088
05022 Pathways of neurodegeneration - multiple diseases
125938088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125938088
04121 Ubiquitin system [BR:
puc04121
]
125938088
03029 Mitochondrial biogenesis [BR:
puc03029
]
125938088
Enzymes [BR:
puc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125938088
Membrane trafficking [BR:
puc04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
125938088
Aggrephagy
Other aggrephagy associated proteins
125938088
Xenophagy
Other xenophagy associated proteins
125938088
Ubiquitin system [BR:
puc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125938088
Mitochondrial biogenesis [BR:
puc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
125938088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
Rad60-SLD
IBR
Dsc3_N
Rad60-SLD_2
Crinkler
Motif
Other DBs
NCBI-GeneID:
125938088
NCBI-ProteinID:
XP_049509121
LinkDB
All DBs
Position
B2
Genome browser
AA seq
462 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRDDLTVQSCD
LDQQSIVHVVLRPWRKGPEREGGDGPQNALEGSRREPESLTRVDLSSSVLPAHSVGLAVI
LNNDREETLPAGRPAGRPPYNIFYVYCKGPCQRIQPGKLRVRCGTCRQATLTLAQGPSCW
DDVLIPNRMTGECQTASCPGTTAEFFFKCGAHPTADKETSVALNLITTNSRGITCITCTD
IRSPVLVFQCNHRHVICLDCFYLYCVTRLNDRQFIHDPQLGYSLPCVAGCPNSLIKELHH
FRILGEEQYNRYQQYGAEECVLQMGGVLCPHPGCGAGLLPEPGRRKVTCEGGNGLGCGFV
FCRDCKETYHEGECSTLFEASGAVSQAYRVDEKAAEQARWEEASKETIKKTTKPCPRCHV
PVEKNGGCMHMKCPQPQCRLEWCWACSCEWNRACMGDHWFDV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgaccag
ttgcgtgtgattttcgccgggaaggagcttagggatgacttgactgtgcagagctgtgac
ctggaccagcagagcatcgttcatgttgtgctgagaccctggagaaaaggcccagaaagg
gaaggaggcgacggcccacaaaacgccctggagggctcgaggagagagcccgagagcttg
acccgtgtggacctcagcagctcggtcctccctgcgcactcggtgggtctggctgtgatc
ctgaataatgaccgtgaggagaccctgccagctggaaggccagcaggtagaccgccttac
aacatcttttatgtttattgcaaaggcccctgtcaaagaatacagccaggaaaactcagg
gtgcggtgtggtacctgccgacaggcgacgctcaccttggcccagggtccatcttgctgg
gacgatgtcttaatcccaaaccggatgactggtgaatgtcaaactgcaagctgtcctggg
actacagccgaatttttctttaaatgtggagcacacccaaccgctgacaaggaaacatca
gtggctttgaacctgatcacaacaaacagtcgaggcatcacctgcataacatgtaccgac
atcaggagccctgtcctggttttccagtgcaaccatcgccacgtgatttgcttagactgt
ttctacttatactgtgtgacaagacttaacgacaggcagtttatccatgaccctcagctg
ggctactctctgccgtgtgtggctggctgccccaactccttgattaaagagctccatcac
ttcaggatccttggagaagagcagtacaaccggtaccagcaatatggcgctgaagagtgt
gtgctccagatggggggcgtgctgtgccctcaccctggctgtggagcagggctgcttccc
gagccaggcaggaggaaggtcacttgtgaagggggaaatggtctgggctgcgggttcgtc
ttttgccgggactgtaaggaaacgtaccatgaaggtgaatgcagcaccctgtttgaagcc
tcaggagcagtttctcaggcctacagagttgacgagaaggccgcggaacaagctcggtgg
gaagaggcctctaaagagacaatcaagaaaaccaccaagccctgtccccgttgccatgtg
ccagttgaaaaaaatggaggatgcatgcacatgaagtgcccgcagccccagtgccgtctg
gagtggtgctgggcctgcagctgcgagtggaaccgcgcctgcatgggggaccactggttc
gacgtgtag
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