Panthera uncia (snow leopard): 125938616
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Entry
125938616 CDS
T08832
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04151
PI3K-Akt signaling pathway
puc04510
Focal adhesion
puc04512
ECM-receptor interaction
puc04518
Integrin signaling
puc04820
Cytoskeleton in muscle cells
puc04974
Protein digestion and absorption
puc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125938616
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125938616
04518 Integrin signaling
125938616
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125938616
09142 Cell motility
04820 Cytoskeleton in muscle cells
125938616
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125938616
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125938616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
puc00535
]
125938616
Proteoglycans [BR:
puc00535
]
Extracellular matrix (ECM) proteoglycans
Others
125938616
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
125938616
NCBI-ProteinID:
XP_049509835
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Position
B2
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AA seq
901 aa
AA seq
DB search
MKNFWKIPIFFFVCSFLGSWASAVVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSSGKEQVGVKINGQTQSVAFSYKGLDGSLQTATFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQISVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITVIETTDQRGPPGQQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPVGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIVGAK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPGVPGSKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGPPGKLGSLGSPGLPGLPGPPGLP
GMKGDRGAVGEPGPKGEQGSSGEEGEAGERGELGDIGLPGPKGSVGNPGEPGLRGPEGSR
GLPGVEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHLAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGER
GERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGTSWASWF
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaattccaattttcttctttgtctgcagtttcctgggatcttgg
gcatctgcagttgtcaagcgtcgcccaaggttccctgttaattcaaactctaatggtgga
aatgaactctgtccaaaggttaggattggccaagatgatttaccagggtttgacttgatt
tctcagttccaggtagataaagcagcatctagaagagctattcagagggtagtgggatca
acggcattacaagtggcttacaaattgggaaataatgtagacttcaggattccaacaagg
catttatatcccagtggtctgcctgaagaatactcctttttaactactttccggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaggattcctcagggaaggag
caagttggtgtgaagattaatggccaaacccaatctgttgcattttcatacaagggactg
gatggaagtctccaaactgcaaccttttcaaatttgccttccttgtttgattcccagtgg
cataagatcatgatcggtgtggaaaggagtagtgctactctttttgttgattgcaacagg
attgaatccttacctataaagccaagaggccaaatcagcgtcgatggctttgctgtgcta
ggaaaacttgtggataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc
cactgtgacccactacgcccgaggagagaaacctgccatgaactgccagctaggataact
gtcatcgagaccaccgaccagagaggtcccccaggccagcagggtccccccgggcctccg
ggcccccctggagttccgggcatcgatggcatcgacggtgaccgaggtccaaagggtccc
ccgggccccccgggtcctgctggagaaccgggcaagccaggagctccgggcaagccaggc
actccgggcgcggacgggttaacaggacctgatggatcccctggctctgtgggaccaaga
ggacaaaaaggagaacctggtgttccgggatctcgtggatttcctggccgtggtattcct
gggccccctggtcctcctggggcagcaggactccctggagagcttggccgtgttggacca
gttggtgaccctgggaaaagaggaccacctggcccccctggccccccaggacccagtgga
acaattggttttcatgatggagatccattgtgtcccaattcctgtccaccaggtcgctca
ggatatccaggcttaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
cctggaagacaaggtcacaagggtgaagaaggtgaccagggggaacagggagaagtcgga
gctcaaggacctccaggagctcaaggattaagaggcatcactggcatagttggggccaaa
ggggaaaaaggtgctcggggcttagatggagaacctggtcctcaaggtctccctggtgca
cctggtgatcaaggacagcgaggacctccaggagaaacaggtcccaagggagatagagga
cctcaaggttctagaggaattcctggtgtccctgggtccaaaggagacacgggcttgcca
ggtgtggatggccgtgatgggatacctggaatgcctggaacaaagggtgaaccagggaaa
cctgggcctcctggtgatgcaggattgcaagggctacctggtgtacctgggatccctgga
gcaaagggtgttgctggtgaaaagggtaacacaggtgctccagggaagcctggtcaattg
gggaattcaggcaaaccgggccaacaggggcctccaggagaagtgggaccccgaggaccc
cgagggcttcctggtagcagaggtgaaataggaccagtgggacccccaggaccaccaggt
aaactgggttctctgggtagtcctggcctccctggcttgcctggcccccctggacttcct
ggaatgaaaggtgacaggggagcagttggtgaacctggtccaaagggtgaacagggttcc
tctggtgaagaaggagaagcaggagaaaggggtgaacttggagatataggattacctggg
ccaaagggatctgtgggtaaccctggggagcctggcttgagggggcctgaaggcagtcgg
gggcttcccggagtggaaggaccacgaggaccgcctggaccgcgaggcgtgcagggagag
cagggtgccaccggcctgcctggcatccagggccctccaggtagagcaccaacagatcag
cacataaagcaggtttgcatgagagtcatgcaagagcatcttgctgagatggctgctagt
ctcaagcgaccggactcaggagcctctggcctccctgggaggcctggaccccctggtccc
ccaggacctcctggagagaatggtttcccaggccagatgggacttcgtggcctcccaggc
attaaaggcccccctggtgctcttggtttgagggggcctaaaggtgacttgggagaaagg
ggggaacgtggccctccaggaagaggtcctaagggcttgcccggagctacgggtctccca
ggtgaaccaggtcctgccagctatgggaggaatggccgggatggcgagcgaggcccccct
ggggtggcaggaattcctggtgtaccgggcccccccgggacctcctgggcctcctggttt
ttgtga
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