Panthera uncia (snow leopard): 125939029
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Entry
125939029 CDS
T08832
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125939029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125939029
Enzymes [BR:
puc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
125939029
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125939029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
125939029
NCBI-ProteinID:
XP_049510491
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Position
B2
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AA seq
387 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVLGADFVGLDIEFTGLRSNQSRPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGVLDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHNILTGNWKVRSSLDKDQIKVVIDEVTRWLDLAEEGDW
MTLPGIAGFQAFEIQLVLRQALPNIWTVLRDQGIIVKKVSKQHRWYLENTSCDRESCWKE
KILLSARGFSVFFQMLVKAQKQPLVGHNMMTDLLHLHEKFFRPLPESYDQFKLNIHSLFP
VLIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTKSSGPVIIHASKCEKYAETKYP
HEAAYDAFLCGSVLLKVAHLLLWRVHG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgggcgccgacgagttcgagcagagcctccctctgctgcaggagctcgtcctg
ggcgcggacttcgtgggtctggacatagagttcacgggccttcgttctaaccagtcccgg
ccccagcagatcagcctgttcgacctgccctcggagtggtatctaaagacccgtcagagt
gttcagcaatttacaatctgtcagattggattgtctgtgttttccagtattgaaggagag
tcaaacaagtatgtagcccattcgtgtaacttctttctcttccccacgacgtttggggtt
ttggattcggagttctctttccaggcttccagtgtccagtttctgaatcagtatggcttt
gactacaacaagtttctcaaaaacgggatcccatatatgaatgaagaacaggagaagaaa
atcaaacacaacatcctgactgggaactggaaagttcgcagttctctggataaagaccag
atcaaggtggtgattgatgaggtgacacggtggctggacctggcggaggagggcgactgg
atgactctccctggtattgctggcttccaggcctttgagatccagctggtgctgaggcag
gccctccccaacatctggacggtcctgagagaccaggggataatagtgaaaaaagtgagc
aaacagcatcgctggtaccttgagaacacctcctgcgatcgagagagctgttggaaggag
aagattcttctctctgcgaggggtttttctgtgtttttccagatgctggtgaaagcccag
aagcagcccttggtgggccacaacatgatgacagacctactgcatctgcacgagaagttc
ttccggccgcttccagaaagctatgatcaatttaagctgaatatccacagcctatttcct
gttctcattgacaccaagaatgtgacaaaggacatctggaaggaactgaatttcccaagg
gtttcgaatctctcagaagtttatgaagtcctaaacagtgacttgaatcctaccaaaagt
tccgggccagtgattattcacgcaagcaagtgcgaaaaatacgctgagaccaagtacccc
cacgaggctgcgtatgatgctttcctctgtggctcagttcttctgaaagtggcacatttg
ctcctgtggagagtacatgggtga
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