Neopusillimonas aestuarii: G9Q38_03065
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Entry
G9Q38_03065 CDS
T06486
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pud
Neopusillimonas aestuarii
Pathway
pud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G9Q38_03065 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pud03021
]
G9Q38_03065 (rpoA)
03400 DNA repair and recombination proteins [BR:
pud03400
]
G9Q38_03065 (rpoA)
Enzymes [BR:
pud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G9Q38_03065 (rpoA)
Transcription machinery [BR:
pud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G9Q38_03065 (rpoA)
DNA repair and recombination proteins [BR:
pud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G9Q38_03065 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QIM48222
LinkDB
All DBs
Position
complement(652141..653142)
Genome browser
AA seq
333 aa
AA seq
DB search
MSSQALLKPRSIEVESLTPNHAKVVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQIT
GVVHEYSTLPGVREDVVDILLNLKGVVFKLHNREEVTLTLRKQGAGEVKASDIELPHDVE
IINPDHIIATLTEDGKLEMQIKVDQGRGYVPGNVRALSEDSAHTIGRIILDASYSPIRRV
SYAVESARVEQRTDLDKLVMDIQTNGVISPEEAVRQAARLLMDQISVFAALDGPGDVVTE
AVGGTRGGSKEPIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLG
RKSLNEIKEVLAARGLTLGMKLDNWPPLGLERP
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacaagctctgttgaagccccgttctatcgaggttgaatcccttacccccaac
cacgcaaaagtggtcatggagccgtttgaacgcggctatggtcatacgttgggtaacgca
ttgcgccgcattctgctgtcttccatgacaggctatgcgccaaccgaagttcaaattacg
ggtgtggttcacgagtattccacgctgcccggcgtgcgtgaagacgttgtcgacattttg
ttgaatttgaaaggcgtcgtattcaagctgcacaaccgtgaggaagtgacactcactttg
cgcaagcaaggtgccggcgaagtgaaggcatcggatatcgagttgcctcacgacgtggag
atcatcaaccccgatcacatcattgccaccttaactgaagacggcaagctggaaatgcag
atcaaggttgatcagggtcgcggatatgtccccggcaacgtgcgtgccctctcggaagac
agcgctcatacgattggccgtattattcttgacgcatcttatagccctattcgccgcgta
agttatgcggttgaaagcgcgcgtgttgagcaacgtaccgacctcgacaaactggtgatg
gacatccagaccaacggggttatttcgcctgaagaagcagtacgccaggcggcccgtttg
ctgatggatcaaatctcggtcttcgccgcgctcgacggcccaggcgatgtggtaaccgaa
gcagtcggcggcacccgtggcggcagcaaagaacctatcgatcctgttctgttgcgacct
gtcgacgaccttgaactgaccgttcgttccgccaactgtctgaaagccgaaaatatttac
tatatcggcgatctgattcagcgcaccgagaacgagttgttgaaaacaccgaacctgggt
cgcaagtcgttgaatgaaatcaaggaagtgctcgccgcgcgtggccttacattgggtatg
aagctcgataactggccaccactgggtcttgagcgtccttaa
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