KEGG   Neopusillimonas aestuarii: G9Q38_06365
Entry
G9Q38_06365       CDS       T06486                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pud  Neopusillimonas aestuarii
Pathway
pud03030  DNA replication
pud03430  Mismatch repair
pud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G9Q38_06365 (dnaQ)
   03430 Mismatch repair
    G9Q38_06365 (dnaQ)
   03440 Homologous recombination
    G9Q38_06365 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pud03032]
    G9Q38_06365 (dnaQ)
   03400 DNA repair and recombination proteins [BR:pud03400]
    G9Q38_06365 (dnaQ)
Enzymes [BR:pud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G9Q38_06365 (dnaQ)
DNA replication proteins [BR:pud03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G9Q38_06365 (dnaQ)
DNA repair and recombination proteins [BR:pud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G9Q38_06365 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QIM48827
LinkDB
Position
1319456..1320184
AA seq 242 aa
MRQIILDTETTGLDPAQGHRVVELACVEMVNRSLTGRHLHLYLNPDRDSDPEALAVHGLT
TDFLSSHPRFHEVADQLVEYVRGAEVIIHNAAFDVKFLNAELERAGLPRFNTLCEKITDS
LLYARELHPGKRNSLDALCERYGISNAHRTLHGALLDSELLAEVWLSMTRGQDSLLMDID
DKSVSALGIAGGVSFDASSLKVLRAAPEETERHREYLEALDKTSGGSCVWRQYETAGTSG
NE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtcaaattattttagatacggaaaccacgggcctggacccggcgcaagggcaccgg
gtggttgaattggcctgcgtcgaaatggtgaatcgcagccttaccggacgccatttgcat
ttatatttgaatccggatcgcgactccgaccctgaggcgctggcagttcacgggctcaca
accgactttttgtcttcccatccgcgctttcatgaggtggcggatcaactggtagagtac
gtgcgcggtgccgaggtcattattcacaatgcggcattcgatgtgaagtttctgaatgcc
gaacttgagcgggccgggctccctcggttcaatacgctgtgcgagaagattaccgattcg
ttgctgtatgcccgtgaactgcaccccggtaaacgcaactcgctggacgctttatgtgag
cgttatggcatatccaacgcgcaccgtacgctgcatggggccttgctcgattccgaattg
ttagccgaagtttggttatcgatgacgcgtgggcaagacagcttgttaatggatatcgac
gacaaatcggtttcggctctcggcatcgccggcggggtctcattcgacgcctcttcgctg
aaagtattgcgtgccgcgccggaagaaactgagcgacatcgtgaatatctcgaggccctt
gataagacctcaggtggatcttgtgtctggcgtcagtatgaaacggccggcacatccggc
aatgaatag

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