Neopusillimonas aestuarii: G9Q38_09020
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Entry
G9Q38_09020 CDS
T06486
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pud
Neopusillimonas aestuarii
Brite
KEGG Orthology (KO) [BR:
pud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pud03032
]
G9Q38_09020
03036 Chromosome and associated proteins [BR:
pud03036
]
G9Q38_09020
03400 DNA repair and recombination proteins [BR:
pud03400
]
G9Q38_09020
DNA replication proteins [BR:
pud03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G9Q38_09020
Chromosome and associated proteins [BR:
pud03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
G9Q38_09020
DNA repair and recombination proteins [BR:
pud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
G9Q38_09020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
QIM49308
UniProt:
A0A6G8I8C3
LinkDB
All DBs
Position
1849967..1850329
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AA seq
120 aa
AA seq
DB search
MTKSELIALLATRYPQLALRDTDLAVKTVLEAMTQALADGQRIEIRGFGSFSLSKRAPRV
GRNPKSGEKVMVPGKQVPHFKAGKELRERVDAAFEQEQAGNKAEKAELFPTSYDTKIAHG
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
gtgactaagtcagaactgatcgccttattggccacccggtatccgcaacttgcgttgcgt
gataccgacctggctgtgaaaacggtgcttgaagccatgactcaggcgttggccgatggt
cagcgcattgaaatccgtggctttggcagtttctctttatcgaagcgggcgcctcgtgta
gggcgcaatcccaaatcgggagaaaaagtcatggtgccgggtaaacaggttccccatttc
aaggccggtaaagagctgcgtgagcgggttgacgcggcatttgagcaggaacaggccggt
aacaaggcagagaaagctgaactttttccaacgtcgtacgacacgaaaattgcgcatggc
tag
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