Paenarthrobacter ureafaciens: FV140_03905
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Entry
FV140_03905 CDS
T06726
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pue
Paenarthrobacter ureafaciens
Pathway
pue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FV140_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pue03019
]
FV140_03905
03400 DNA repair and recombination proteins [BR:
pue03400
]
FV140_03905
Enzymes [BR:
pue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FV140_03905
Messenger RNA biogenesis [BR:
pue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FV140_03905
DNA repair and recombination proteins [BR:
pue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FV140_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Zn_ribbon_TFIIB
MFS18
HDPD
Motif
Other DBs
NCBI-ProteinID:
QMU81389
LinkDB
All DBs
Position
800367..802532
Genome browser
AA seq
721 aa
AA seq
DB search
MANIPQNVALPVQSPTRQQALECLRELVGNPQAEFHDGQFEAIEALVDAGRRALVVQRTG
WGKSAVYFVSSLLLRRRGAGPTLIVSPLLALMRDQVAAAARAGVRAVAINSANALEWDTV
LAQLAADEVDVLLVSPERLTNPSFRENQLPELIRRTGLLVVDEAHCISDWGHDFRPDYRR
IADLITQLPETVPVLATTATANSRVVHDIEEQLGEGVLTIRGPLGRESLRLGVLNLPDSR
DRLGWLLTHLNDLPGSGIIYTLTVSAAEDTARLLAEAGHNVLAYTGRTDPADRERAEQLL
KDNQVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRGAANADVLLLPGS
EDREIWQYFATASMPSAEKAQAVLNVLDEAGSALSTVALEARVDLRRTPLELLLKVLAVD
GAVERVGDGWKATGQPWAYDAERYSRIAEARVDEQESMIVYEDTSGCRMEYITSVLDDET
AAPCGRCDNCAGQWFPKDIAEAAADAAGQTLRRAGIVVEPRLQWPSGMDRLGVAVKGKIK
PDQSVAEGRVLARLTDLGWGGALRELFAAGAPDRQVDPAMLQACVQVLREWSGAEGGTAW
SGAGRPVAVVSVPSRSKPQLVDSLARGIAGIGRMPYLGALQPHHGGPVGARGGNSAYRLA
GVWERFAVGEELGQALVGAQGQPVLLVDDLIDSRWTMTVAGRCLREAGAGAVLPLALAQA
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcccgcaaaatgtcgctcttcctgtgcagtcgcctacacgccagcaggcg
cttgaatgcctcagggagctcgtcgggaatccccaagccgagttccatgacggacaattc
gaggccatcgaagcgctggtggacgctggacgcagggccctggtggtgcagcgtaccggg
tgggggaagtccgccgtctatttcgtgtcgtccctgttgctgcgcaggcgcggggcgggg
ccaaccttgattgtttcccctttgctggcgctcatgcgggaccaggtggctgctgcggcc
cgggcaggtgtacgggccgtagccatcaactcggcaaatgcattggagtgggatacggtc
ctggcccagctggcggcggacgaggtcgatgtcctgctggtgtccccggaacgcctgacc
aatccctccttccgggagaaccagcttcccgagttgatccggcggacgggtctgctggtg
gttgatgaagcgcactgtatttcggactggggccacgatttccggccggactaccgccgc
atcgcggacctgatcacgcaattgccggaaaccgtccccgtgctggccaccacggccacg
gcgaactcgcgtgttgtccatgacatcgaggagcagctcggggaaggggtactgaccatc
cgcggccccttgggcagggaatccctgcggttgggagtgcttaacctccctgactcccgg
gaccgccttggctggttgctcacgcatctgaacgatctgcccggcagcgggattatctac
accctgaccgtttccgccgccgaggacaccgcccgcctgcttgccgaggcggggcacaac
gtcctggcttacacaggacgcaccgatcccgcggacagggagcgcgcggagcaattattg
aaggacaaccaggtcaaagcgctggtagcgacgtcagccttgggcatggggttcgacaaa
cccgatctcggcttcgtcatccacttgggcgcgccgtcgtcgcctgtcgcgtactaccag
caggtgggccgtgccggacgtggcgctgcgaatgccgacgtcctgctgcttcccggctcc
gaagaccgcgagatctggcaatacttcgccaccgcttcgatgccttcggccgagaaagcg
caggccgtcctgaacgtcctggatgaagctggttccgccctttccacggtggccttggaa
gcgagggtggacctgcgccggacgcccctggagctgctgctcaaggtgctcgccgtggat
ggagcggtggaacgggttggagatggctggaaggcaaccgggcaaccctgggcctacgat
gctgaacgctactcccgcattgccgaggcacgcgtggacgagcaggaatcgatgatcgtc
tacgaggacacctcggggtgccgcatggagtacatcacctcagtccttgacgatgaaacc
gcggcaccttgcggccgttgtgacaactgtgccgggcagtggttcccgaaggacattgcc
gaggcagccgctgacgctgcggggcaaacgcttcgccgggcgggaattgtggtggagccg
aggctgcagtggccgtccggaatggaccggctgggtgtggcggtgaagggcaagatcaag
ccggaccagtccgtggcggaagggcgtgtcctggcccgcctgaccgacctgggctggggc
ggagcgctgcgtgaactctttgccgccggcgctccggaccgccaagtggaccctgccatg
ctccaagcctgcgttcaggtgctgcgggagtggtccggtgccgagggcgggacggcgtgg
agtggagcgggccgtccggtggccgttgtgagtgttccttccaggagcaaaccacagctg
gtggactcgctggcccggggaatcgccggcataggccgcatgccgtacttgggtgccctg
caacctcaccatggcggacccgttggagcccggggtggcaacagcgcttaccgccttgcg
ggagtatgggaacggtttgcggtgggtgaagaacttggccaggcgttggtgggcgcgcaa
ggacagcctgtactcctggtggacgatctcatcgacagtcggtggaccatgacggtggcc
ggccggtgcctccgggaagcaggtgcgggggcggtccttcccctggcgttggcccaggct
ggatag
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