Paenarthrobacter ureafaciens: FV140_05205
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Entry
FV140_05205 CDS
T06726
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pue
Paenarthrobacter ureafaciens
Pathway
pue03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pue00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FV140_05205
09124 Replication and repair
03420 Nucleotide excision repair
FV140_05205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pue03021
]
FV140_05205
03400 DNA repair and recombination proteins [BR:
pue03400
]
FV140_05205
Enzymes [BR:
pue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FV140_05205
Transcription machinery [BR:
pue03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FV140_05205
DNA repair and recombination proteins [BR:
pue03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FV140_05205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QMU81607
LinkDB
All DBs
Position
complement(1065799..1067463)
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AA seq
554 aa
AA seq
DB search
MTDGPLIVQSDKTILLEVDHELATEARHAIAAFAELERAPEHMHSYRLTPLGLWNARAAG
LDAEQVLDTLLKYSRFPVPHALLIDIEETMSRYGRLRLEKDPQHGLVMRTDDYPVLEEVI
RAKKIAPLLGPRIDGETVVVHSSQRGQLKQLLLKLGWPAEDLAGYVDGQPHLIMLDETDW
QLRPYQKVATENFWAGGSGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTVSARQWKDE
LLKRTSLTEDEIGEYSGAVKEVRPVTIATYQVLTTKRGGLYPHLELVDGHDWGLIIYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREGEVFSLIGPKRYDAPWKDIEAQGYIAP
ADCVEVRVDLPRDERVAYAMAEDADKYRLCATSETKTALVEQLVEAHKGEQLLVIGQYID
QLDEISERLDAPLIKGETSVKARQKLFDAFRKGELQTLVVSKVANFSIDLPEASVAIQVS
GSFGSRQEEAQRLGRLLRPKQDGRAARFYSLVARDTLDQDFAAKRQRFLAEQGYAYRIMD
AKDVGKDVGTEQGQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggtccgctgatcgttcaaagcgataaaaccatcctgttggaagtcgaccac
gagttggctaccgaagcacggcacgccatcgctgccttcgcagaactcgaacgcgcaccg
gagcacatgcacagttaccggctcacccccctgggcctctggaatgcacgggccgcagga
ctggacgccgaacaggtgctggacaccctgttgaagtactcccgctttcccgtaccccac
gcgctgctgatcgacattgaagaaaccatgtcccgctatggccgcctgcgcctggaaaaa
gacccgcagcacggtctggtgatgcgcacggacgactacccggtgctggaggaggtcatc
cgcgccaagaagattgcgccgttgttgggcccgaggatcgacggcgagaccgtggtggtg
cattcctcccagcgcgggcagctgaagcagttgctcctcaagctgggctggccggccgag
gacctggccggctatgtggatggccagccgcacctgatcatgctggacgagacagactgg
cagctgcgcccgtaccagaaggtggccacggagaacttctgggccggcggcagcggcgtc
gtcgtgcttccctgcggcgccggcaagacgctggtgggggcagcggccatggccacctcc
tcgaccaccacgctgatcctggtgaccaacaccgtctcggcccgccagtggaaggacgaa
ctcctcaaacggacctccctgaccgaggacgagatcggcgagtattcaggtgccgtcaag
gaggtccggcccgtcaccattgccacctaccaggtgctcaccaccaaacgcggcgggctg
tacccccatcttgaacttgtcgacggccatgactggggactgatcatctatgacgaagtc
cacctgctgcccgccccgatcttccgcatgactgccgacctgcaagcccggcggcgactc
ggcctgaccgccaccctggtccgtgaagacggtcgcgagggcgaggtcttcagccttatc
ggccccaaacgctacgacgctccctggaaggacatcgaagcccagggctacattgccccc
gccgattgcgtggaggtccgggtggacctgccccgggacgagcgcgtggcctacgcgatg
gccgaggacgctgacaagtaccggttgtgcgccacatcggagactaagaccgccttggtg
gaacagctcgtggaggcacataaaggcgagcagctactggtcattggacagtacatcgac
cagctggatgagatttccgaaaggctggacgctcccctgatcaagggcgaaaccagcgtc
aaggcccgccagaaactctttgatgccttccggaagggcgagctccaaactttggtggtg
tccaaggtggcgaatttctccatcgacctcccggaagcctccgtcgcgatccaggtttcc
ggttccttcggctcccggcaggaggaggcgcaacgcctgggccggctcttgcggcccaag
caggacggccgggccgcacgcttctactcgctggttgcccgcgacacgctcgaccaggac
ttcgccgccaaacggcaacggttcctggccgagcagggttatgcctaccgcatcatggac
gccaaggacgtcggaaaggacgtcgggacagaacagggccagtaa
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