Paenarthrobacter ureafaciens: FV140_08830
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Entry
FV140_08830 CDS
T06726
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pue
Paenarthrobacter ureafaciens
Brite
KEGG Orthology (KO) [BR:
pue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pue03016
]
FV140_08830
Enzymes [BR:
pue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FV140_08830
Transfer RNA biogenesis [BR:
pue03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FV140_08830
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QMU82226
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All DBs
Position
complement(1898156..1899481)
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AA seq
441 aa
AA seq
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MTPEKLEKTTTGDPVADPTTHIKVDGFDSHVPEIIELDSPREGVPPVIDTMAGLERCAAA
IAAGSGPAGVDAERASGFRYGQRAFLVQIRREGSGTWLIDPEPFENLAIINDALRGVEWI
LHAATQDLPCLSELGMWPDKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLAELREELIELLEADGKLEFAEQEFAGILAAGIALPRVDAWR
KTSGLHQIRDRRQLAAVRELWLERDQLARKRDVAPGRLIPDSALVAAAKALPTTVPQLLA
TKGFHGRSAQREAPRWLRCITAARMLTELPPLHLPTNAPPPPRVWADRDAEAAARLVTAR
PALQEKADELKLPVENLLTPDYLRRVLWRPPSEVSHQTVADELRALGAREWQISFAAPII
VEACLNPQPLPAKEPKPKDSP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgaaaaactggaaaaaaccacaaccggcgacccggttgctgatcccacaacc
cacatcaaggtggacggcttcgacagccacgttcccgaaatcatcgaactggattcaccg
cgcgaaggcgtccctccggtcatcgacaccatggccggactggagcgctgcgccgcagcg
attgccgccggatccgggcctgcaggggtcgatgccgaacgcgcctcgggcttccgttac
ggccaacgagctttcctcgtccagatccggcgggaaggatccggtacgtggctgatcgat
cctgaaccgtttgagaacctggccatcatcaatgacgccctccgcggcgtcgaatggatc
ctccatgcggcaacgcaggacctcccatgcctgtccgagctcggcatgtggccggacaag
ctgttcgacaccgaacttgccgcccgcctcgccggattgccccgggtaggcctggcagcc
gtcatcgagcaattgcttggcttcggcctggccaaggaacactccgccgccgactggtcc
acccgaccgctccctgaaccgtggttgcggtacgcagcactggacgtcgaggtcctcgca
gaattgcgcgaagaactcatcgaactcctggaagccgacggaaagctggaattcgccgaa
caggagttcgccggtatcctcgccgccgggatcgcacttccccgcgtggatgcgtggcgc
aagacgtcgggcctccaccagatcagggaccggcggcaactcgcagccgtgcgcgaattg
tggttggagcgggaccagctggcgcggaagcgggacgtggcaccgggacggctcatcccc
gattccgcactggtggccgccgcaaaagccctgcccaccaccgtcccccaattgttggcc
accaagggattccacggcaggtcggcgcagcgggaagcacccagatggctccgctgcatc
accgcggcccgtatgctgaccgagcttcccccgctgcatctgcccaccaacgcaccgccg
ccgccccgcgtttgggcagaccgcgatgctgaagcagccgcccgcctcgtcactgcccgg
cctgccctccaggaaaaggcggacgagctgaagctgccggtggaaaacctgctgaccccg
gactacctgcggcgggtactgtggcggccgccgtcggaagtctcgcaccagacggtcgcc
gacgaactgcgcgccctgggagcccgcgaatggcagatttcgttcgccgccccgatcatc
gtcgaggcatgcctgaacccacagccgctcccggccaaggagcccaagcccaaagattct
ccgtag
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