Paenarthrobacter ureafaciens: FV140_16135
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Entry
FV140_16135 CDS
T06726
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pue
Paenarthrobacter ureafaciens
Pathway
pue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FV140_16135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pue03021
]
FV140_16135
03400 DNA repair and recombination proteins [BR:
pue03400
]
FV140_16135
Enzymes [BR:
pue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FV140_16135
Transcription machinery [BR:
pue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FV140_16135
DNA repair and recombination proteins [BR:
pue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FV140_16135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
CDPS
Motif
Other DBs
NCBI-ProteinID:
QMU83444
LinkDB
All DBs
Position
complement(3443356..3447255)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEENRHAELPNLQVEHDLEKKQLIDNRDSDIAQIARDLEDE
LARLEGEGAKGADKKKARDSADRQMANVRKRADADIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGMYFEGSMGAEAIKKRLETFDMQAEAESLRDIIQNGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
VFSSVSEAIMAYDARELHLNSQVKIRLENFVPYAGWEAPEGWEPGQPALVETSLGQVIFN
QTLPEDYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPDTKPGILAGYENMAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQAMRDSLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVPDSNGELVLDE
NVENSAYARTLAVDVVDAQGNVLAPAGTDCGDVVIGQLLAAGITEVKVRSVLTCESKVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSAGGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRITIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GDHVSVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGDSDLLPGELAERTRFEEENRRVVSEGKAPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTQVTVEPTEEAKAS
LFTGPSAFTDFSYDALGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgtggctggtcttacggtgaggtcaagaagccggaaaccatcaactaccgcactctcaag
cctgagaaggacggtcttttctgcgagaagatcttcggaccttcccgtgactgggaatgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgttgtggcgtt
gaagtcacccgcgccaaggtgcgccgtgagcgcatgggccacatcgagctcgccgctccc
gtcacccacatctggtacttcaagggcgttccgtcgcgccttggctaccttctggacctg
gctccgaaggacctcgagaaggtcatctacttcgctgcctacatgatcaccagcgttgac
gaggaaaaccgccacgctgaactgccgaacctccaggtcgagcacgacctcgagaagaag
cagctgatcgacaaccgcgacagcgacatcgcccagatcgcccgcgaccttgaagacgag
cttgcccgtcttgagggcgagggtgccaagggtgcggacaagaagaaggcccgcgactcc
gcggaccgccagatggcgaacgtccgcaagcgcgccgacgccgacatcgagcgccttgag
caggtctgggaccgcttcaagaacctcaaggtcgccgacctcgaaggtgacgagggcctg
taccgcgaactgcgtgaccgttacggcatgtacttcgagggctccatgggtgccgaagcc
atcaagaagcgtcttgagaccttcgacatgcaggctgaggctgagtccttgcgcgatatc
atccagaacggcaagggccagcgcaagacccgcgccctgaagcgcctcaaggttgtcaac
gcgttcctcaccacgaacaacagcccgctcggcatggttctcgacgccgtcccggtgatc
ccgccggaactgcgcccgatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctctaccgccgtgtgatcaaccgaaacaaccgcctcaagcgcctgcttgacctc
ggtgctccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgtcgtggccgtcccgtcactggcccgggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggccgtttccgccagaacctgctcggtaag
cgtgttgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggcctgccgaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggcaaagcgcatggttgagcgttaccgt
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacctaccctgcaccgccttggtatccaggccttcgaaccgcagcttgttgaaggtaag
gcaatccagcttcacccgctggtttgtggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagcccggaagcccaggccgaagcccgcatcctgatgctg
tcctcgaataacatcctgaagccgtccgatggccgcccggtcaccctgccttcgcaggat
atgattatcggcctgtaccacctgaccaccaagcgcgtcggctctgccggcgagggccgc
gtgttctcctcggtgtcggaagccatcatggcctacgatgcccgtgaactgcacctgaac
tcccaggtgaagatccgtctggagaacttcgttccctacgcaggttgggaagctccggaa
ggttgggagcccggtcagccggctctcgttgaaacctccctcggccaggtcatcttcaac
cagaccctgcctgaggactacccctgggttgaggctgttgcggacaagggcgaactgtcc
cggatcgtcaacgacctcgcagagcgctacccgaaggttgttactgcggcaacgctggac
aacctgaaggacgccggtttctactgggctacccgctcgggcgtcaccgtggccatctcc
gacatcgaagttccggacaccaagccgggcatccttgccggttacgagaacatggctgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggaactg
atcgagatctggaacaaggcaaccaacgagatcgcccaggcgatgcgtgacagcctgtcc
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgccagatcgcgggtatccgtggtcttgtggccaacccgaagggtgaaatcatcccgcgt
ccgatcaagtcctcctaccgtgagggcctgtcggtgctggaatacttcatcgccacgcac
ggtgcccgtaagggtctggccgataccgctctccgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtctcgcaggacgtcatcgtccgcgaagaggactgtggaaccgag
cgcggcctggtcacgccgatcgcagttccggactccaacggcgagttggtcctggacgag
aacgtcgagaacagcgcctacgcacggacgctggctgtcgacgtcgtcgatgcccagggc
aacgtcctggcaccggccggcaccgactgcggcgacgtcgtgatcggccagctgctcgca
gccggcatcaccgaggtcaaggtccgttccgttctcacctgtgagtccaaggtcggcact
tgtgccctgtgctacggccgttcgctggcaaccggcaagaccgtggacatcggagaggcc
gtcggcatcatcgccgcacagtcgattggtgagcccggtacccagctgaccatgcgtacg
ttccacaccggtggtgctgtatccgcaggtggtggcgacgacatcacccagggtctgccc
cgtatccaggaactgttcgaagcccgtactccgaagggtgtggcaccgattgcggaagca
gccggacgcatcaccatcgaagagtccgagcgccagatgcgcctggtgatcactccggac
gacggttccgaagagatcgcctacccggtactgcgccggtcccgcctcctcatcgaagac
ggcgaccacgtcagtgtcggccagaagctgatcaacggtccggtggacccgaagcaggtt
ctgcgcatcatgggtccgcgtgcagcacagaagttccttgtggacgaagtgcagggcgtt
taccgcagccagggtattggtatccacgacaagcacgtcgaggttatcgtccgccagatg
ctgcgccgcgttacggtcatcgagtccggcgactccgacctcctgccgggtgaactggca
gagcgcacgcgcttcgaggaagagaaccgccgcgtcgtgtccgagggcaaggcaccggct
tccggccgtccggagctcatgggtatcaccaaggcttccttggccaccgagtcctggctg
tccgcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgatccgctgctcggcctcaaggaaaacgtcatcatcggtaagctcatcccggctggt
acgggtctgccgcgctacacgcaggtcactgtggagccgacggaagaagcaaaggcaagc
ctgttcacgggccccagcgctttcaccgacttctcctatgacgccctgggtggggacggt
gcccccgagttccacgccatcccgctggatgactacgacctcggcaacgacttccgctga
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