Pelosinus sp. UFO1: UFO1_0561
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Entry
UFO1_0561 CDS
T03211
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
puf
Pelosinus sp. UFO1
Pathway
puf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UFO1_0561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puf03021
]
UFO1_0561
03400 DNA repair and recombination proteins [BR:
puf03400
]
UFO1_0561
Enzymes [BR:
puf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UFO1_0561
Transcription machinery [BR:
puf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UFO1_0561
DNA repair and recombination proteins [BR:
puf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UFO1_0561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AIF50116
LinkDB
All DBs
Position
661203..665150
Genome browser
AA seq
1315 aa
AA seq
DB search
MLDVNNFDSMRIGLASPEQIRKWSFGEVKKPETINYRTLKPEREGLFCEKIFGPTRDWEC
HCGKYKRIRYKGIVCDRCGVEVTRSKVRRDRMGHIQLAAPVSHIWYFKGIPSRMGLILDI
SPRSLEKVLYFASYIVLDPGDTPLMKRQLLTENEYRDYRDKYGNSFKVGMGAEAVKKLLE
ELDLEKISKELKQELKEVSGQRKIRAIRRLEVTEAFRKSGNRPDWMIMDVVPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKE
MALELFKPFVMKKLVNAGHAHNIKSAKRMVERVRPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPVLSEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQSEARMLMLAAHNIL
STKDGKPVVTPTQDMVLGAYYLTMEKKGDIGEGKIMCDINEALLAYHQKELSLHAIIKVR
FPKYGLVTTTMGRLIFNENLPEEVRYFFQKDGEWHLGIMMDKKELGKLVAETYRQFGNSK
TAVVIDNVKRLGYAFACRAGMTVAIADINIPPEKKDILGTTEGRVDVVDKQYRRGLITED
ERYKKTIELWTKATDDVTSAMMNNLDNFNPIYMMANSGARGNIQQIRQLAGMRGLMADPS
GRIIDRPIKANFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRE
EDCDIVGINLVRERARLAKSSAGAIEVLRDTLLGRVLAEDVLDPKTTDILIPRSTILADD
SLRIIGEHGVPEIILRGMSTVMEEDINASASNETIVLGAPEEKMRELLKNAMVREMLGKN
TTNAITDSNGVEIVAAETPLTEEAIEAVLVSDVREVKVRNNNIRGIEVEAITEGSGVIEA
LKDRIVGRFVAEDIIDPKTGEYIVKTNDTINEALADRIVAVREHVSIRSVLTCRSQFGVC
IKCYGRNLATGHPVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEEL
FEARKPKRQAIITEIDGVAAVDVKEVKGMRKITVVPTVGEERIYPIPYGARIIVRDGQQI
IAGDRLTEGSVNPHDILRVCGIQATQRYLVYEVQKVYKSQGVEINDKHIEVIVRQMLHKV
KTEESGDTELLPGEYIDTNTFEEENAKAIEAGGEPSVARPILLGITKASLATDSFLSAAS
FQETTRVLTEAAIKGKIDPLLGLKENVIIGKLIPAGTGMSRYRNIKLTHTKNVTV
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtaaacaattttgattcaatgaggattggattagcttctccggagcaaatc
cgcaaatggtcatttggcgaggtaaaaaaaccagagaccataaattaccgtactcttaag
ccagagcgtgaaggtttattttgtgaaaaaatatttggaccaactcgtgactgggaatgt
cattgtggtaaatacaaaagaattcgctataaaggtattgtctgcgaccgttgcggtgta
gaagtaacgcgttcaaaagtacgacgtgatcgtatgggacatatccaactagcagcacct
gtatctcacatttggtattttaagggtatccctagtcgtatggggctgatattagatatc
tcgcctcgttctttagaaaaagtattatatttcgcttcttatatcgtacttgatcctggt
gatacaccgctcatgaaacgtcaactattgacggaaaatgagtacagggattaccgagat
aaatatggtaattctttcaaagttggtatgggagcggaagcagttaaaaagcttcttgaa
gaattagatttggagaaaatctccaaagaattaaaacaagagcttaaagaagttagcggc
caacgtaaaattagagcgattcgtcgtttagaagttactgaggctttccgcaaatcgggt
aatcgtcctgattggatgatcatggatgttgtgcctgttattccgccagaattaagacca
atggtacagctagacggtggtcgttttgcgacctctgatcttaatgatttgtaccgtaga
gtaattaaccgcaataatcggttaaagcgtctattagacctaggtgctcccgatattatt
gtgcgtaatgaaaaacgtatgttgcaagaagccgttgatgccttgattgataatggccgt
cgcggtcgtcctgttacaggtcctggtaatcgtcctcttaaatccttaagtgatatgctc
aaaggaaaacaaggtcgtttccgtcagaatctattaggtaaacgggtagactactctggc
cgttcggttattgtagttggtcctgaactaaagttacatcaatgtggtttgccgaaagaa
atggcgttagaattgtttaaaccttttgttatgaaaaaactagtgaatgctggtcatgct
cataacattaagagtgctaaacgtatggtagagagggtgcgcccagaagtttgggatgta
ttagaagaagtgattaaagaacacccagtgctcttaaatcgtgctcctaccctacataga
ttggggattcaggcatttgaaccagtattgtcagaggggcgcgccataaaacttcatccg
ttagtatgtacagcatataatgcggattttgatggtgaccaaatggcggttcatgtacca
ctttctgcggaagcacaatcagaagcccgtatgttgatgttagctgctcataatatccta
tcaaccaaagatggtaaaccggtggtaacaccgacccaagatatggttctaggagcatat
tacctcaccatggagaaaaaaggcgatatcggtgaaggtaagataatgtgtgatattaat
gaagcattacttgcttatcatcaaaaagaattgtcccttcatgccataattaaagtacgt
tttccaaagtatggtttggtaactactactatggggcgtctgatatttaacgaaaacttg
cctgaagaagttcgctatttcttccaaaaagatggcgaatggcatttaggtattatgatg
gataaaaaagaacttggtaaattggtagctgaaacctatcgacaatttggtaattccaaa
acagccgtagtaattgataatgttaaaagactcggttatgcttttgcttgtcgtgcaggt
atgacagtagctattgctgatattaatattcctcctgaaaagaaggatattttgggtact
accgaaggtagagttgatgttgtcgacaagcaatatcgtcgtggtttgattactgaagat
gaaagatataagaaaacaattgaactatggacgaaagctactgatgatgttacatctgcg
atgatgaacaatttggataattttaatccaatttatatgatggctaactcaggggcccgt
ggtaatatccaacagattcgtcagttggctggtatgcgtggacttatggctgatccatcg
ggacgaattattgaccgtccaatcaaagcaaacttccgtgaaggtttaacagtacttgaa
tactttatttccactcatggtgctcgtaaaggtttggctgatacagcacttagaacagcc
gattctggttatttgacacgtcgtttggttgacgtatcccaagatgtcattgttcgcgaa
gaagactgtgatattgtaggaattaatttagtacgtgaacgggcacgattggcaaaatcc
agtgctggtgcgattgaagtattgagagatacactgttaggccgagttttagcagaagat
gttcttgatcctaaaactacggatatactgattcctcgttctaccatacttgcagatgat
agtttgcgtatcattggcgagcatggagtaccagaaattatattacgtggtatgtcaact
gttatggaagaagacattaatgcatctgcttctaacgaaacaattgtgttaggcgcgccg
gaagaaaaaatgcgcgaacttcttaagaatgctatggttcgtgaaatgttgggtaaaaac
acgacaaatgcgattactgacagtaatggcgttgaaattgttgcggcagagacaccgctt
actgaagaagccattgaggcagttttagtgagtgatgtacgcgaagtgaaggttcgtaac
aataatattaggggtatcgaggtagaagcaatcactgaaggctctggtgttatcgaagcc
ttaaaagatcgtattgttggacgctttgtcgcagaagacattattgaccctaagacaggt
gaatatatcgtgaaaaccaatgataccatcaatgaagcattggcagatcgtatcgttgct
gtgcgtgagcatgtatccattcgttccgtacttacttgtaggtctcaatttggagtatgt
attaaatgttatggacgcaatctagcaacggggcatcctgttgatgtcggtgaagcagta
ggtattattgctgctcagtctatcggtgaacctggtacacagcttactatgcgtaccttc
catactggtggtgttgctggtgacgatattacccaaggtttgccaagggttgaggaatta
tttgaagcccgtaagccaaaacgtcaagcgattattactgaaattgatggcgtagctgct
gttgatgtaaaagaagtaaaaggtatgcgtaagattacagtagttcctactgtgggcgaa
gaacgtatttatcctattccttatggtgctcggattattgtgcgtgatggacagcagatt
attgctggtgatcgcctcaccgagggctcagtaaacccacatgacattttgcgtgtctgc
ggtattcaagcgacacaaaggtacttggtatatgaagtacaaaaagtatacaaatcccag
ggtgttgaaattaatgataaacatatcgaagtaattgttcgtcaaatgctccataaggtg
aaaacagaggaatctggcgacactgaacttttaccaggtgaatacattgatacgaatacc
tttgaagaagaaaatgcaaaagcaattgaggcaggcggtgagccatctgtagcacgtcct
atattgcttggtattaccaaagcttctttggcaacagactccttcttatccgcggcatct
ttccaagaaacaactcgtgtacttacggaagctgctattaagggtaaaatcgatccattg
cttggacttaaggaaaatgttattatcggtaagttaataccagcaggtactggtatgagt
cgttatcgaaacataaaacttacccatacaaaaaatgtaacggtatag
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integrated database retrieval system
