Pelosinus sp. UFO1: UFO1_0981
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Entry
UFO1_0981 CDS
T03211
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
puf
Pelosinus sp. UFO1
Pathway
puf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UFO1_0981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puf03019
]
UFO1_0981
03009 Ribosome biogenesis [BR:
puf03009
]
UFO1_0981
Enzymes [BR:
puf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UFO1_0981
Messenger RNA biogenesis [BR:
puf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UFO1_0981
Ribosome biogenesis [BR:
puf03009
]
Prokaryotic type
rRNA helicases
UFO1_0981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIF50536
LinkDB
All DBs
Position
1112051..1113391
Genome browser
AA seq
446 aa
AA seq
DB search
MADFSSLGIRPEINVILAQSGITVPTDIQIQAIPVLLAGKDVVGQSQTGTGKTLAFVLPI
LEKIEVNKPIVQALIITPTRELALQITQEVTKLADKLGVQVLSVYGGQDVDRQIKKLKSG
AQIVIGTPGRLMDHLRRKTIYLSGVSKLVLDEADQMLHMGFLDDVEELVRQTSPKRQTML
FSATMPSKVRGLADRYMRKPVDIRVQTPNITLDEIKQIMVEVPEPEKMAKLCTMIDEYRP
YLAIVFCHTKQRATAVNIALSQKGYDTDELHGDLSQAKREQVMRRFREAKIQILVATDIA
ARGLDVEGITHVFNYDIPHDVDSYIHRIGRTGRAGQTGMAITLIDPHEQPYVRLIEQGIS
ASIEKHKVSGQRVISKDKRRVFQDKREDQTKVRGEKKENPFILGKPEKKKPVGHSGANIR
SRRKPKDTEKSNQQYQGKSKGKKSRA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttagttccctaggtattagaccagaaattaatgttatattggcacaaagc
ggcattaccgtaccaacggatatacaaatacaggcgattcctgttttactggcaggtaag
gatgttgtcggacaatctcaaacaggtacaggaaaaacgttggcatttgtgctgccaatt
ttagagaaaattgaagtgaataaacccatcgtacaagctttaatcattactccaacgaga
gaattagcccttcaaattacgcaggaagtaaccaaattggcggataagctaggagttcaa
gtattatctgtatatggagggcaagatgtagatcgacaaattaagaaactaaaaagtggt
gctcaaattgtaataggtactcctggtcgcttaatggatcatttacgacgcaaaactatt
tatctttcaggggtaagtaagctagtattagatgaagcggatcaaatgctacatatggga
tttttggatgatgtggaggaattagttcgtcaaacatctcccaaacggcaaactatgctc
ttttcagcaactatgccttctaaggttcgtggtttagcagatcgttatatgcgaaaaccc
gttgatattcgggtgcaaacccctaatattacattagacgaaatcaaacaaatcatggta
gaggttccagaaccagaaaagatggcaaagctatgtaccatgattgacgaatatcgccct
tacttggctatcgttttttgtcatacaaagcagcgtgccacggctgtgaatatagccctt
tcccagaaagggtatgatacagatgaacttcatggagatttgtctcaggcaaaacgtgag
caggttatgagacgttttcgtgaggccaagattcagatcttagtagcaacggatattgcg
gctagaggattggatgtagaagggattactcatgtatttaattatgatattccacatgat
gttgatagctacattcatcgtattggacgaacaggacgtgcaggacaaactggtatggca
atcactcttatagatcctcatgagcaaccttatgtgcgcctcattgaacaagggatcagt
gcatccattgaaaaacataaagtaagtggtcaaagagtaattagtaaagataagagaaga
gttttccaagacaagagagaagatcaaacaaaagtaagaggagaaaaaaaggaaaatcca
tttatcctgggaaaaccggagaaaaaaaagccagttggtcacagtggggctaatataaga
agccgacgtaaaccaaaggatactgaaaagtccaatcagcagtaccaaggcaaaagcaaa
ggcaagaaaagtagagcttga
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