Pelosinus sp. UFO1: UFO1_1560
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Entry
UFO1_1560 CDS
T03211
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
puf
Pelosinus sp. UFO1
Pathway
puf03030
DNA replication
puf03430
Mismatch repair
puf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UFO1_1560
03430 Mismatch repair
UFO1_1560
03440 Homologous recombination
UFO1_1560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puf03032
]
UFO1_1560
03400 DNA repair and recombination proteins [BR:
puf03400
]
UFO1_1560
Enzymes [BR:
puf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UFO1_1560
DNA replication proteins [BR:
puf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UFO1_1560
DNA repair and recombination proteins [BR:
puf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UFO1_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AIF51111
UniProt:
A0A075KAA5
LinkDB
All DBs
Position
1741218..1744646
Genome browser
AA seq
1142 aa
AA seq
DB search
MKQQLQHSNNKPFVHLHVHTEYSLLDGASRVNALVKRAKELGMPAIAITDHGTMYGAIEF
YKQAKKQGIKPIIGCEVYVAPRSRQERTMVEGEAYYHLVLLAETDEGYRNLIELVSRANT
EGFYYKPRVDKELLSIYSKGLICLSACIAGEIPSWLLKGNIDTAEALIQEYITIFGKDNF
FLELQDHGIPEQKKVNKFLIEMAEKFGVGLVATNDLHYINKKDAECHDVLLCIQMGKTVD
DTARMKFSSDEFYLKNFDEMSQLFGEHPKALTNTCLIAERCNVNLEFGNLYLPEFPVPEG
LTADEYLEQLCKEKLAERYSDITPEVLERLAFELDVIIKMGFAGYFLIVWDFINHARQQE
IPVGPGRGSAAGSIVSYLLGITNIDPIAYGLLFERFLNPERVTMPDIDIDFCYVKRGKVI
EYVSERYGADKVAQIITFGTMAAKGAIRDVGRALNMPYGEVDRIAKMVPNELGITLKRAL
EISSEFRTAYESEAMVGKLLDLAMAVEGLPRHASTHAAGLVISKEPLTHYVPLQNSAEGF
LTTQYDKDKVEELGLLKMDLLGLRTLTVIGDTIKLVKESQGIKIDIDKIPFDDPKVSAML
TSGDTAGVFQLESSGMTALVKDLKPECFADLIPLVALYRPGPLGSGMVEDFINGRNGKKQ
VTYVHPLLEPILHDTFGVILYQEQVMQIASVMAGFTLGQADLLRRAMGKKKHDVLDAQRE
NFLRGAMERGIEGKMAGEIFDLMAHFADYGFNKSHSAAYALVAYQTAYLKANYPQEFMAA
LLSSVMGTNDKIGSYIETCRQMGIAVLPPDINASQSSFSVDGSGIRFGLAAVKNVGENAI
QNMVASRDADGKFESLVDLCTRVDMRVINKRVIESLIKCGAFDSLGARRSQLLAVLDRAV
DMAGVRQRDRVSGQIGLFGEETLNEADELILPDIPEIPKDQILALEKEITGFYVTGHPLD
AYRDKMNHFTPLSELVSGEYGDGKSVKVAGLIMNAKRITTRNGDMMCFMVLEDFTEQMEV
IVFPRIFDKFSKVLLPDMPVKVSGRLNMSEDKAKVIADDIQLLSDTENIEVRLKISKLQE
SGEVFEQLKQVFKMYPGSSVVFLHLIDSRRVIKTEKQFWIKPTAQAIEALENIIGKGRVT
VA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacaactacagcattcgaataataaaccatttgtacatttacatgttcataca
gaatatagcttattagatggtgctagccgtgttaacgctttagtaaagcgggcaaaggaa
ttgggtatgccagccattgcaattacagatcatggcactatgtatggcgctatagaattt
tataaacaagcaaaaaaacaaggtattaagccaattattggctgcgaagtatacgtggct
cctcgctctcgtcaggaaagaacaatggtggagggagaagcctactatcatttagtactt
ttggcggaaacggacgagggctatcgtaatttgattgagcttgtgtcacgggccaataca
gaaggtttttattataaaccaagggtggataaggaactactcagtatctatagtaaaggg
cttatttgtctaagtgcctgtattgcaggagaaatcccatcttggttgttaaaaggaaat
attgatactgcagaggctttgattcaagagtatattaccatattcggcaaagataacttt
tttttggaactacaggatcatggaataccagaacaaaaaaaggtaaataagttcttaata
gagatggccgagaagtttggtgttggcttagtagctactaatgacttacattatattaat
aaaaaggatgcggaatgtcatgatgtgctgttatgcattcaaatgggtaagacggtagat
gacacagctaggatgaagttttctagcgatgaattttatctgaagaatttcgatgaaatg
tcccagttatttggagaacatccaaaagccttgacaaatacttgtcttattgctgagcgc
tgtaatgtaaatctagagtttgggaatttgtatttgcctgaattccccgtaccagaaggt
cttacagcagatgagtaccttgagcagctatgtaaagagaaattagcggaacgttacagc
gatatcacacctgaggtactagagcgtcttgcatttgagctagacgtgattataaagatg
ggttttgctgggtactttttaattgtgtgggattttattaatcatgctaggcagcaggag
attccagtcggaccaggcagagggtcagcagccggtagtattgtgtcttatttgctaggg
attaccaatattgatcctattgcctacggattgctgtttgaaaggtttctaaatcctgag
cgggtcaccatgcccgatattgatattgatttttgttatgtgaaacgcggtaaggttatc
gaatatgtatcggaacgatatggggctgataaagtggcccaaattattacctttggaacg
atggcagcaaagggagctattcgcgatgtagggcgggctttaaatatgccttatggagaa
gtcgaccgcattgctaaaatggtgccaaatgaactgggcataactttaaaacgtgccttg
gaaattagctctgaatttcggacagcttatgaaagcgaagcaatggtgggaaaacttttg
gatttggccatggcagttgaaggtttgccccggcatgcttctacccatgcagctgggctc
gtaatttccaaggagcctttgactcattatgtgccactgcagaactcagccgaaggtttt
ctgacgacccagtatgataaggataaagtagaagagctaggcttattgaagatggacttg
ctcggccttagaaccttaactgtcattggcgatacgataaagctagtgaaggaaagtcag
ggcatcaaaatagatattgataagatcccttttgatgatcctaaagtaagtgctatgttg
acgagtggggatacggcgggagtctttcaattagagtcaagtggtatgactgctttagtt
aaagacttaaaaccggaatgttttgcagatttaattcctttagtcgctttatatcggcca
ggtcctttgggaagcggcatggtggaagactttattaatggacgcaacggtaaaaagcaa
gtgacttacgtacatcctttactagagcctatcttacatgacacctttggcgttatccta
taccaggaacaggttatgcagattgcgtctgttatggctggttttactttaggtcaagct
gatcttttgcggcgggcgatgggtaaaaagaaacatgatgtactagatgctcagcgagag
aactttttacgtggcgcaatggagcggggcattgaaggaaaaatggcgggagaaatcttt
gacttaatggcccattttgcggattatggctttaataaatctcatagtgcggcttatgcc
ttagttgcttatcaaacagcctatttaaaggcaaattacccccaggaatttatggcggcg
ctgctatctagtgttatggggacaaatgataaaataggctcttatattgaaacttgtcgc
caaatgggaattgctgtattgccgccagatataaacgcgagtcaaagcagctttagtgtt
gatggttctgggatacgctttggtttggccgcagtaaaaaatgtaggggagaatgccatt
caaaatatggtagcttcccgtgatgcagatggaaagtttgaatcattagtggacttatgt
acaagggtagatatgcgggttattaataagcgtgttattgaaagtttgattaaatgtggg
gcttttgactcattaggggcaagacgttcccagctgctagctgtactggatcgtgctgtc
gatatggctggggtaagacaaagggatagagtcagcgggcaaattggactctttggtgaa
gaaactctaaatgaggcagatgaacttatcttgcctgatattcctgaaattccaaaagat
caaatactagccttagaaaaagaaattactggtttttatgttacagggcatcctctagat
gcttatcgggataagatgaatcattttacaccattaagtgagcttgttagtggtgagtat
ggagatggtaagtcagtaaaagtagctggtcttattatgaatgcaaaacgcattacgact
cgtaatggggatatgatgtgttttatggtccttgaggattttacagaacagatggaagta
atcgtttttccaagaatatttgacaagtttagtaaagttttgctgcccgatatgcctgta
aaagtaagtggacgtctaaatatgagtgaagataaggcgaaagtaattgcggatgatatt
cagctccttagtgatacagaaaatatagaagtacggcttaaaataagtaagctgcaagag
agtggagaagtgtttgaacaattgaaacaagtttttaaaatgtatcctggttcatctgtc
gtatttttacatcttattgacagccgtcgtgttattaagacggaaaaacaattttggatt
aagcccactgcccaagcaattgaggcattagaaaatattattggtaaaggccgggtaacg
gttgcctga
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