Pelosinus sp. UFO1: UFO1_2968
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Entry
UFO1_2968 CDS
T03211
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
puf
Pelosinus sp. UFO1
Pathway
puf03030
DNA replication
puf03430
Mismatch repair
puf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UFO1_2968
03430 Mismatch repair
UFO1_2968
03440 Homologous recombination
UFO1_2968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puf03032
]
UFO1_2968
03400 DNA repair and recombination proteins [BR:
puf03400
]
UFO1_2968
Enzymes [BR:
puf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UFO1_2968
DNA replication proteins [BR:
puf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UFO1_2968
DNA repair and recombination proteins [BR:
puf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UFO1_2968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
NP_C_Orthomyx
Motif
Other DBs
NCBI-ProteinID:
AIF52511
LinkDB
All DBs
Position
complement(3113735..3114313)
Genome browser
AA seq
192 aa
AA seq
DB search
MRELAPIRMNFVAIDFETANASRSSVCSMAAVTVENGQIVRSAYSLIRPPVLKFDYRNIQ
VHGIHPEDVVNKPTFDQLWERIRPHLENKIVIAHNATFDISVLRGVLREYSLPMPVFKHS
CTVQIAKKAWPGGENYKLNTLAQRFQIDFDHHNALHDARTCAKIALLAGQELKADNFLQM
MHLLKLPVKDFA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttggcgccaataagaatgaatttcgtagcaattgattttgaaacggccaat
gcgagtcgttctagtgtgtgtagcatggctgcggtaacagtggaaaatggacaaatcgtc
cgatcggcttactctttaatacgcccgccagttcttaaatttgactatcgtaatatacag
gtgcatggcattcacccagaagatgtagtgaataaaccaacttttgatcaattgtgggaa
cggattcgtccgcatcttgaaaataaaattgtgattgcccataatgcaacttttgatatt
agtgtgctacgaggtgtcctaagggaatattcattgcctatgccagtttttaaacatagt
tgcacagttcaaattgcgaaaaaagcatggcctggtggggaaaactataagcttaataca
ttagctcagcgctttcagattgattttgaccatcacaatgctctgcatgatgcacgaact
tgtgctaaaattgctctgctagcggggcaagagttaaaagctgacaattttctgcagatg
atgcatttgttgaagcttcctgtaaaagattttgcctaa
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