Pelosinus sp. UFO1: UFO1_4124
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Entry
UFO1_4124 CDS
T03211
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
puf
Pelosinus sp. UFO1
Pathway
puf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UFO1_4124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puf03400
]
UFO1_4124
Enzymes [BR:
puf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UFO1_4124
DNA repair and recombination proteins [BR:
puf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UFO1_4124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
HHH_2
HHH
AAA_22
HHH_8
NTPase_1
PIF1
AAA_5
PhoH
AAA_16
UvrD-helicase
DNA_pol_lambd_f
nSTAND3
AAA_28
Helicase_RecD
UvrD_C
bpMoxR
TrwB_AAD_bind
SLFN-g3_helicase
T2SSE
CPT
TsaE
NPHP3_N
AAA
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AIF53667
UniProt:
A0A075KJ31
LinkDB
All DBs
Position
complement(4358840..4360996)
Genome browser
AA seq
718 aa
AA seq
DB search
MEYLEGTVENIIFQNTDNGFVVFKLKPANENGAVAVVGSMLVPLVGEQLELTGEWAEHAR
FGRQFKATSYKKVAPASVKGIERFLASGAIKGIGPAMAARLVKQFGLDTLKIIEEKPKRL
QEIEGIGKKKAEAIHEAYAQQSEMHEVMLFLEMNGVTGAYAGKIFAQYGFLAISVLQENP
YRLAQEVQGIGFRTADQIAMSLGLERDHEERIAAGIDFALLQISQGGHCCVPEDILVQEA
AKLLLIEPINVARRVSQLIQNDSLCVEDFHGMTLVYPRHLYYAEKRVAERLLRLKDRAKE
APDEDLVAIVDRWEKQSGITLAEAQREAVLSSLLHGVLVLTGGPGTGKTTVVRGMLDVLE
DQGFKLLLGAPTGRAAKRLNEATDREAMTVHRLLESTGGTEGAPLFMRNEKDPLDAEVVI
IDEVSMMDISLMNHFLQAIPDGCRVILVGDVDQLPAVGPGSVLKDIIRSTTVPVVRLTEV
FRQAGESMIVMNAHQINRGMLPDFKSSNDFQFKEINDSDAVAQSIVELCRDVLPKEGFNV
SYDVQVLAPMHRLVCGVENLNKLLQQALNPESDGKASVSGANQVLREGDKIMQMKNNYTK
GVYNGDIGFITGIQNGRVAVRYPEQDVIYERGELEELHLAYAMSVHKSQGSEYPVVIMPL
ISGHHVMLQRNLLYTAVTRAKERVILLGSKAALNTALMNDRTKRRYSLLAERLRGEEL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatatttagaaggtactgtagaaaatatcatatttcaaaatactgacaatggcttt
gtcgttttcaaactaaaaccagcgaatgaaaatggggcggtagccgttgtgggtagtatg
ctggtgcccttggttggtgaacaattagaactaactggggaatgggcggagcatgcccgt
tttggccgccaatttaaagccaccagttacaagaaagtagcacctgccagtgtgaagggt
attgaacgctttttggcctcgggggccattaaaggcattggtcctgccatggcggcacgg
ttagtaaagcagtttggccttgataccttaaaaattattgaagagaagccgaaacggttg
caagaaatagagggaattggcaagaaaaaagcggaggccattcacgaagcctatgcccag
caatctgaaatgcatgaggtcatgctatttttggaaatgaacggagtaacaggggcctac
gcaggtaaaatttttgctcaatatggatttttggcgattagcgtattacaggaaaatccc
taccgtttagcccaagaagtacaaggtataggctttcgtactgcggatcagattgccatg
tcgttagggttagagcgggaccatgaggaacggattgcagcggggattgacttcgcttta
ttacagatttcccaaggcgggcattgttgtgtaccggaggacatattagtgcaggaggcc
gccaagctattattgattgagcctatcaatgtagctaggcgtgtatctcagcttattcaa
aatgatagtttatgtgttgaagattttcatggtatgactcttgtgtatcctcgtcactta
tattatgcggaaaaaagagtagcggaacggttattgcgtttgaaagatagggcgaaagaa
gcacctgatgaagacttggtggcgattgttgatcgctgggaaaagcagtcagggatcacc
ttggctgaagcccaaagggaagcggttctatcttccttacttcatggtgtattggtgtta
acgggtgggccaggcactgggaaaaccacagttgtcaggggcatgctggatgtactagaa
gatcaaggttttaaattgctcttaggggcacctactgggcgagcggcaaagcggctaaat
gaggctacggaccgagaagccatgacagtacatcgcttgctagaatcgactggcgggacg
gaaggcgcacctttatttatgcgcaatgaaaaggaccctttagatgcggaagttgtcatc
attgatgaggtttctatgatggatatttctttgatgaatcattttcttcaagcgatacct
gacggttgtcgagtcattttagttggtgacgtagaccagttgccagcagttggaccaggg
tctgtactcaaggatattattcgctccacaacggtgccagtcgtacgcttaacggaagtt
tttcgccaggcaggggaaagcatgattgttatgaatgcccatcagattaaccgagggatg
ttgcctgattttaaaagcagtaatgattttcagtttaaagaaattaatgatagcgatgcg
gtagctcagtctattgtagagctatgtcgtgatgtgcttcctaaggaaggttttaatgtt
tcctatgatgtgcaagtgttggcccctatgcacaggctagtgtgtggtgtagaaaatttg
aacaagctgcttcagcaggctttgaatcctgaaagtgatggcaaagcctctgtttctggt
gccaatcaagtcctccgagaaggggataagattatgcagatgaaaaataattataccaaa
ggggtatataacggggatattggttttattacaggtattcaaaatggcagggtagccgtt
cgttatccagagcaagatgtgatttatgaaagaggcgagttagaggaactgcaccttgct
tatgccatgagtgtacacaagagccaaggcagtgaataccctgtggtcattatgccactc
atttcgggacaccatgtcatgctacagaggaatctgttatacacagccgtaacaagggcc
aaagaacgggtcatcctcctaggcagcaaagctgccctcaacaccgccctaatgaacgat
cgtaccaaacgccgctactccctcctcgcggaacgcctgcgtggagaagagttgtag
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