Pelosinus sp. UFO1: UFO1_4732
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Entry
UFO1_4732 CDS
T03211
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
puf
Pelosinus sp. UFO1
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puf03400
]
UFO1_4732
Enzymes [BR:
puf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UFO1_4732
DNA repair and recombination proteins [BR:
puf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
UFO1_4732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD_C_2
ANAPC1
Motif
Other DBs
NCBI-ProteinID:
AIF54267
UniProt:
A0A075KKT9
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All DBs
Position
5028954..5032406
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AA seq
1150 aa
AA seq
DB search
MKLRLIIGRAGCGKTQYCLEEMGQMLAASPEGRSMIMILPEHATFQVEHELASTPGIDGF
TRAYVFGFRRLAHRILMETGGAVRPHITELGKRIVLNKLLHEHREDFKIFHRAAAQRSFA
DILVSMIQEFKAYGVSPESLAEIEGQCGDLPIGDKIHDLALVYQGFENFLQGRYTDPEDY
LTLLAKKIPQSAILHQAEVWIDGFTWFNPQEADVVAGLLANSASVTITLCLADAKSSEQA
SETALFHRQWDTRRKLLDMARKMGAEIEEVELTQNQRFTAPLLGHMEAQLFTFPSAVWAG
ETKGAVVTEAANRRIEVEGMARDMLRLCREEGYRWRDIGILLRDPESYAELVETVLADYE
IPFFSDRKRQPVHHPLAELLRSSIEVITERWSYEPLFRCFKTDLFDLSRDDIDKLENYVL
EFGIRGTKWTNGQLWTFIRRFSLGEDAELNEVQQEHLQTINEVRSKASAPLLLLEQQMKA
ATTVLEMTTALYEFLAGLMVPEKLEQWAVHAEEIGDLEQAREHRQLWDQVIQLLEQIVEI
CGTEEMTVADYGIMLSEGLEGLTLSLIPPGLDYVTVSPMEQTSLVNIKSIYVPGVNDGVL
PMRGRGEGLLTDAERGQMIQFGLELAPGSQSDSFAERFLVYTALTRAKEYLWLSYPLADE
EGKGLSPSLLIKRIRELARVPFHSLPVEPITGSEQQYIAHGKRSISALAAVLRSYKSGEK
IAGVWWDVYNWARQEQGLEWYVQRAVAGLFHHNQVESLPGNLANRLYPKQNKLRGSVTRF
ESYQACPFKHFAQYGLSLKERAVFRLQAPDWGQFLHAALKGFGDSLQDAGRDWGSMSEGE
YKEIVNQVVEELAPKLQNEILLSSEQHKHLVGRLKRTVTRAVRRLVEFDRVSTFKPIAME
KSFGRGEDALPPLVYMLPDDISLEIVGQIDRLDIAELEGKKYMLIIDYKSGGAWLKLVDV
YYGLRLQLLTYLLVASKAYKDCLPAGVLYYFLKNPNLSDKIKLDADEICKKINGLLKMPG
WVLADSQVIRLLDHTIDGYSEFLKVALKKDDTFYSNCLSYVKEPEEFQLLLSYVEQKLVD
TAREIMAGKIEISPYALDKRTPCGFCQYSAVCQFDSLLPENQYRRLAKQDESTIMGEITQ
GQEVKPNELV
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcttcgtttaattataggaagagctgggtgtggcaagacccagtattgtttagaa
gaaatgggtcaaatgttagcggcatcaccagagggacggtccatgatcatgatcttgccg
gagcacgctacctttcaggtagagcatgagttagcatctactcctggcattgatggtttt
actagggcctatgtcttcggttttcgtcgtttggcacatcgaatcttaatggaaacaggt
ggtgcggttcgccctcatattacagaacttgggaaacggatcgtattgaataaattatta
catgagcatcgagaagattttaagatatttcatcgggcggctgcccaacgtagtttcgcc
gatattttagtcagtatgattcaggagtttaaagcctatggtgtatctccagaatctttg
gcagagatagaagggcaatgtggtgatttgccaattggtgataaaattcatgatttagcc
ttagtgtatcaaggttttgaaaactttttgcaagggcgttataccgatccggaagattat
cttaccttattggcaaagaagattccccagtctgctattttgcatcaagcagaggtgtgg
attgatggctttacttggttcaatccgcaagaagcagatgtagtagctgggctattagca
aactctgctagtgtgaccattaccttgtgtttggcagatgccaagtctagtgagcaggca
agtgagacagccttatttcatcgtcaatgggacacccgaagaaagctattggatatggca
agaaaaatgggggctgaaattgaagaagtggagttaacccagaaccaacgatttacggct
cccttgctagggcatatggaagcgcagctatttacttttccttccgcagtttgggcaggt
gaaaccaaaggagctgtggtaacggaggctgccaatcgccggatagaagtcgaaggtatg
gcaagggatatgttacggttatgtcgggaagaaggatatcgttggcgagatattggaatt
ctgctgcgtgatccagaaagttatgctgaacttgtggagactgtgttagctgactatgag
atacctttctttagtgatcgaaaacgccaaccagtgcatcatcctttagcggaattgttg
cgttctagtatagaagtgatcacggaaagatggagttatgaacctttgtttcgctgtttt
aagacagatttatttgatttgtcccgggatgatattgataaattggaaaactacgtattg
gagtttggtattcgcggtacaaaatggacaaatggtcagctgtggacatttattcgccgt
ttttccttaggggaagatgcggaactaaatgaggtacaacaagagcatcttcaaactatc
aatgaggttagaagcaaagcttctgcgcctttgctgctcttggagcaacagatgaaagcc
gcaacgacggtactagagatgacgacagccttatatgaatttttagcaggattgatggtg
cccgaaaaattggagcagtgggcggtgcatgccgaagaaataggggatttggagcaggcg
agggaacatcgtcagttatgggatcaagttattcagttattagaacaaattgtggagatc
tgcggcacagaggagatgacagtagccgattatgggattatgttgagtgaaggcttggaa
ggtcttactctcagtctcattcctccagggcttgactatgttacagtatctcctatggag
cagactagcttggtaaatattaaaagtatttatgttccaggggtaaatgatggagtattg
cccatgcgcgggcggggtgaaggtttattaactgatgccgaacgagggcaaatgattcag
tttggtttagaactagccccaggttcacagtcggattcttttgcggagcggtttttggta
tatacagccttaacaagagctaaagagtatttatggcttagttatcctctagcagatgaa
gaaggcaaggggcttagtccatccttgctaattaaacggattcgagaattggcaagagta
ccgtttcattctttgcctgtagagcctataactgggagtgaacagcagtatatcgctcat
gggaaacgcagtatttccgctttggcggccgtacttcgaagctacaagagcggtgagaag
attgctggcgtgtggtgggatgtttataactgggcaagacaagaacaagggctggaatgg
tatgtgcaaagagccgtagctgggttgtttcatcacaatcaggtagagtcattgccgggg
aatttggcgaatcgtttatatccgaagcaaaataaactgcggggcagtgttactcgtttt
gaatcctatcaggcctgtcccttcaaacattttgcgcagtatggcttaagccttaaggaa
cgagccgtttttcgtttacaggcacctgactgggggcagtttttgcatgctgctctcaaa
ggatttggtgatagcttgcaagatgccgggcgtgactggggtagtatgagcgaaggggaa
tataaggagattgtcaaccaagtggtggaagaattggcgccaaaactgcaaaatgagatt
ttgttaagctcggaacagcataagcacttggtgggcagactgaaacggactgtgactcgt
gccgtacgtcgtctagtagaatttgatcgggtaagtacgtttaaacccatagccatggaa
aaatcattcgggcggggggaggatgctttgccacctctcgtctatatgttgccagatgat
atttccttggaaatagtcggtcagattgatcgcttggacattgcggaattggaaggcaaa
aagtatatgctaattattgattataagtcagggggagcttggcttaaattggtggatgta
tattatggtttgcggctccagttattaacgtatctgttggtagcgagtaaagcgtataag
gactgtttacctgctggagttttgtattatttcttaaagaatccgaatctctcagataaa
attaagttagacgccgatgaaatttgtaaaaaaattaatggactcttaaagatgccaggt
tgggtattagccgactctcaagtaatacggttattggatcacaccattgatggttattct
gaattcttaaaggttgccttgaaaaaggatgataccttttatagcaattgtttgtcttat
gtcaaagaacctgaagagtttcaattattacttagctatgtggagcaaaaattagtcgat
acggcacgggaaattatggcggggaaaatcgagattagtccgtatgctttagataaacgg
acaccttgtggcttttgtcagtacagtgccgtatgtcagtttgatagtttgttgccagag
aatcaatatcgtagattggcaaagcaagatgaaagtactattatgggggaaattacccaa
ggccaggaggtaaaaccaaatgagttggtctga
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