Paenibacillus urinalis: PUW25_06425
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Entry
PUW25_06425 CDS
T08959
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pui
Paenibacillus urinalis
Pathway
pui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUW25_06425 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pui03019
]
PUW25_06425 (recQ)
03400 DNA repair and recombination proteins [BR:
pui03400
]
PUW25_06425 (recQ)
Enzymes [BR:
pui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUW25_06425 (recQ)
Messenger RNA biogenesis [BR:
pui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PUW25_06425 (recQ)
DNA repair and recombination proteins [BR:
pui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PUW25_06425 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WDI03591
LinkDB
All DBs
Position
1434471..1436351
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AA seq
626 aa
AA seq
DB search
MSIQERTMDEARELLQTYFGYPDFREGQKKIVDSLLRGHDTLGIMPTGGGKSICYQIPAL
LHSGLTLVVSPLISLMKDQVDALLAMGVSAAYINSTLTGREVNDRIRAAQRGELKLLYVA
PERLELDWFRDEMAALPISCVAVDEAHCVSQWGHDFRTSYLAVAPFVDYLPQRPIVAAFT
ATATPAVMDDILELLRLREPETFVTGLGRDNLAMQVLRGENKKEYIMDYTREHADEAGII
YAATRKDVDDLYSRLKSAGIAAGRYHAGMTDDERAASQEAFLFDDIRVVVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSAQDIMTQKFLIEQGEFQDED
RKRNDYRKLQQMIDYCYTTKCLRSAQLDYFGEVHDGTGCGICSSCTDDRELIDMTVDAQK
IFSCIHRMRERFGITMVSQVLKGSRNKKVLEYGFDQLPTHGVMFNRSEKEISEIINVMVS
EGYLTLSEGQYPVVRLQPLAVEVLKGQREVMQRVARVSASTASSRSSRSSRVSRDTSPSA
VNETVFEQLRLIRRELAEKEHVPSYIIFNDATLREMSVVCPQSERDMLKIKGVGEVKFKK
YGQPFLDFFLNQGGSSVDEPYDDYDF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacaagaaagaacaatggatgaggcacgcgagctgcttcagacttacttcggt
tatcccgactttcgggaaggccagaagaaaatagtagacagcttattgagaggacatgat
accctcggtatcatgccgacaggcggcggtaaatcgatatgctatcagattccggcgctc
ctgcattccggtctcactctggtggtgtcacctcttatttccctaatgaaggatcaggtg
gatgctctgcttgccatgggcgtgtctgctgcatatatcaacagtacactgactggacgt
gaagtgaatgaccggattcgggcggcacagcgcggagagctgaagctgttatatgttgct
ccggagcgtcttgagctggactggttccgggatgagatggcggcactgcccatatcctgt
gttgctgtcgatgaagcacactgtgtctctcaatggggacatgattttcggacgagctat
ttggcggtggcgccatttgtagattatctgcctcagcggccgatcgtggctgccttcaca
gcgacggcaacgcctgcggtgatggatgatattctggagctgcttcggcttcgcgagcct
gaaaccttcgtaaccggacttggacgggataatctggcgatgcaggtactgcgcggcgag
aacaagaaggaatatattatggactacacacgcgagcatgcggatgaggcgggcattatc
tatgcggcaacccgtaaggatgtagatgatctgtacagccggctcaaatctgcggggatt
gcagcagggcgttaccatgccggcatgacggatgacgaacgtgcggcgagccaggaggct
tttctattcgatgatataagagtcgttgtcgctacgaatgccttcggcatggggattgac
aagagtaacgtaaggtatgtcattcattacaatatgccgaaaaatatggaagcctacgtt
caggaggcaggacgtgcagggcgggacggtgagccgagtcagtgtattctcctgtttagc
gcgcaggatatcatgactcagaaattcctgattgagcagggtgaattccaggatgaggat
cggaagcggaatgactaccggaagcttcagcagatgatcgattactgctatacgaccaaa
tgtctcaggagcgcacagctggactatttcggtgaggttcatgatggaacaggctgcggc
atatgcagctcatgtacggacgaccgggaactcatcgacatgactgttgacgcgcagaag
atcttctcctgcatacaccggatgcgtgaacggtttggcattacaatggtatctcaggtg
ctgaaggggtcgcggaacaagaaggtgctggagtatggattcgatcagctgcctacgcat
ggagtcatgttcaatcgctcggagaaggaaatatcggagatcattaacgtgatggtatcc
gaaggatatcttaccttatctgagggtcaataccctgtggtaagattgcagccgctggca
gtggaagtgctcaagggacagcgtgaagtgatgcagcgtgtcgcccgcgtaagtgcgtca
accgcctcatcgcgcagcagcagaagcagtcgtgtgagccgggatacatcaccttcggcc
gttaatgaaacggtgttcgaacagctaaggctgattcgcagggagctggcggagaaggag
catgtgccttcttatattattttcaatgatgcgacactgcgcgagatgagtgtggtatgt
ccgcagagcgaacgtgacatgctgaagataaaaggggtcggggaagtgaaattcaagaaa
tacggacagccgttcctcgatttcttcctgaatcagggcggtagttctgtggacgagcct
tatgatgattatgatttttag
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