Paenibacillus urinalis: PUW25_09680
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Entry
PUW25_09680 CDS
T08959
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pui
Paenibacillus urinalis
Pathway
pui02020
Two-component system
pui02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PUW25_09680
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PUW25_09680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pui03021
]
PUW25_09680
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pui02035
]
PUW25_09680
Transcription machinery [BR:
pui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PUW25_09680
Bacterial motility proteins [BR:
pui02035
]
Flagellar system
Flagellar assembly proteins
Stator
PUW25_09680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
HTH_23
PhyR_sigma-like
HTH_WhiA
Motif
Other DBs
NCBI-ProteinID:
WDI04194
LinkDB
All DBs
Position
2075248..2076036
Genome browser
AA seq
262 aa
AA seq
DB search
MTDRNSSHLADMDLWERWKEQGDLDARNQLIEKHLHIVQYVSSRLAVGLPKNVSKDDLES
NGALGLMDALDKFDYKRGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKKIEEAYQH
LEQRYSRSVTDEEMGQYLDVSAGDFRNMLQEVAVMSLYSLEDPLREEDAETRMSLLIDEK
AYAPEQTVRDIHLKQALMQGIDKLTEKERIVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKQRELLMNRD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccgaaattcgtcccatttggcagatatggacctgtgggaaagatggaaggaa
caaggggacctggatgcaaggaaccagctgattgaaaaacatcttcatatcgttcagtat
gtctcaagtcgactcgccgtcggattgcccaagaatgtatcaaaggatgatttggagagc
aatggtgctctgggactgatggatgctctggacaaatttgattataagcgcggacttcaa
tttgagacttatgcttcatggagagtgagaggtgcgattctcgatggcttgcgccagggt
gactgggtgccgagatctgtcagagagaaggcgaagaagattgaagaggcttatcagcat
ttggaacagaggtattcaagaagtgtcactgatgaagagatgggccaatatctcgacgtt
tctgctggagatttcaggaacatgctgcaggaagtcgcggtaatgtcgctgtattcactt
gaggatccactgcgcgaggaggatgcggagacacggatgtcactattgatcgatgagaag
gcttatgcccctgagcagacggtaagagatattcatttgaagcaggctttgatgcagggc
attgataagctgacggaaaaagaaagaattgtggtttccttactatattatgaggattta
tcattgagtgaaattgcagaagtgatgtcattgtcaccatcgcgtatttcccagcttcac
tccaaggcaattctgaggctgagaggtactcttgagaaacagcgtgaactcttaatgaac
agggattag
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