Paenibacillus urinalis: PUW25_17220
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Entry
PUW25_17220 CDS
T08959
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pui
Paenibacillus urinalis
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pui03036
]
PUW25_17220 (xerD)
Chromosome and associated proteins [BR:
pui03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PUW25_17220 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
E1_UFD
Motif
Other DBs
NCBI-ProteinID:
WDI01008
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All DBs
Position
complement(3733469..3734362)
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AA seq
297 aa
AA seq
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MRNYVQPYMNYLQEDKGSSLSTLESYRRDIEQFIGYMDKEQITQAQDVSRNQIVLYMGYL
KKQKKAASTIARNVVSIRSFFHYLMYQGVVQKDPTYHLDSPKLEKSPPKILTIAEVDRLL
SLPDSSTPPGARDKAMLELLYATGIKVSELVQLNVKDLNPQLRFLRTGSNSAKERVIPIT
GVAAQATAEYVNHARSALLKANGEEEALFVNTNGARLTRQGIWKMIKKYAEGAGLAEGRI
TPHTLRHSFAAHLLENGADLRSVQEMMGHADISTTQMYSHVVKRNMKDVYDHYHPRA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattatgtgcagccttacatgaattatttacaggaagacaagggctcttcctta
agtacactggaatcctacagacgtgatatagagcagtttattgggtatatggataaggaa
cagattacacaggctcaggacgtttcacgcaatcaaattgtgctgtacatgggatatttg
aagaagcagaagaaggcagcttcaacgattgctcgtaatgtggtttcgatccgttctttt
ttccattatttgatgtatcagggtgttgtgcagaaagatccaacgtatcatttggactca
cccaaattagaaaagtctcctcccaaaattcttaccattgcagaagtggacagactacta
tcgctgcctgactcttcaacaccgcctggggcaagagacaaagccatgcttgagctgctg
tatgcgacggggattaaagtctctgaattggtgcagcttaatgtgaaggatttaaatccg
cagctgaggtttttgagaaccggcagcaacagtgccaaggagcgggtaatccctataaca
ggggttgctgcccaagcgacagccgaatacgtgaatcatgcccggagtgcgctgttgaag
gcgaatggagaagaagaggcactgttcgtgaatacgaatggtgccaggctgaccaggcag
ggaatctggaagatgattaagaagtacgctgaaggtgctggactcgctgaaggaagaatt
acaccacatacgttaaggcattcctttgcggctcatctactggagaatggcgccgattta
agatcggtacaggaaatgatgggacatgcagatatttcaacaacccagatgtacagccat
gtagtaaaacgaaatatgaaggacgtatatgatcattatcacccgagagcgtaa
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