Paenibacillus urinalis: PUW25_18485
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Entry
PUW25_18485 CDS
T08959
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pui
Paenibacillus urinalis
Pathway
pui00470
D-Amino acid metabolism
pui00550
Peptidoglycan biosynthesis
pui01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PUW25_18485 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PUW25_18485 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pui01011
]
PUW25_18485 (murD)
Enzymes [BR:
pui01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PUW25_18485 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pui01011
]
Precursor biosynthesis
Amino acid ligase
PUW25_18485 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Pyr_redox_3
ADH_zinc_N
XdhC_C
TrkA_N
FMO-like
Motif
Other DBs
NCBI-ProteinID:
WDI01242
LinkDB
All DBs
Position
complement(3990947..3992368)
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AA seq
473 aa
AA seq
DB search
MKHPESYKGMDVVVLGLAKSGVQVAKVLHQAGAHVIVNDQKDRAQCPEASELEALGISVI
CGGHPDDLIHPGVQLLVKNPGIPYKIAPIQKALELGIEVVTEVEVAYHICKAPIIGITGS
NGKTTTTTWVGLLLENAGLSPIVAGNIGTPLSEAAQAAKKEDIMVVELSSFQLKGTTDFR
PAVSCLLNVSETHLDYHGGMEDYITSKAKLFNNQTQEDYAVINWDDPVCRQLVPYIKGRI
LPFSLTETLQVGVYADPPYIPDVEDDIERTIMYRDFDGGIHPIISVDEIKLPGRFNVANA
LAACAIAIAAGAAPTALSAPLSTFRGVEHRMEYVQNHAGADYYNNSKATNAKATLNALTS
FKEPIVLIAGGLDRGSDYMDMLEVFKERVKAVVLLGQTKEKLAEVAKLAGLKDIRIVDNG
EDAAAALVEAVKNASELAQSGDVVLLSPACASWDMFSSYEERGRIFKEAVHNL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatccggagagttataaaggaatggacgtcgttgttcttggcctggccaagagc
ggcgtacaggtggctaaggtgctgcatcaggctggtgcccatgtgattgttaacgatcaa
aaggacagagcacagtgtcccgaagcatccgaactggaggctttgggaatttctgttata
tgcggagggcatccggatgatctgattcatcctggagtgcagcttctggtcaagaacccg
gggatcccatataagattgcgccgattcaaaaagcgctggagctgggcatcgaagtcgtc
actgaggttgaagtggcttatcatatttgcaaagctcccatcattggaattacaggctct
aatggtaaaacaacaacaacaacctgggtaggtcttttgctcgagaatgcaggcttgtcg
ccgattgtggcgggcaatattggtactccgttatccgaggcagcacaggcggccaaaaaa
gaggatatcatggtcgtggagcttagcagcttccagctcaagggaacgacggattttcgt
cctgccgtcagctgcctgctgaacgtttcggagacgcatcttgattaccacggcgggatg
gaggactatattacttccaaagccaaactgtttaacaatcaaacacaagaggattatgcg
gttatcaactgggatgatcccgtatgcagacagcttgtgccctacatcaaagggagaatc
ctgccattctcactgacagaaacactgcaagtcggtgtatacgcagaccctccctacata
ccggatgttgaagatgatattgagagaaccatcatgtaccgtgattttgatggtggaatc
catccgattatttctgttgatgagatcaaactgccgggccgtttcaacgttgccaatgca
ctggccgcttgtgctatagccatcgcagcgggtgcggctcctacagcactatctgctcct
ctctcaactttccgcggtgtggagcaccgaatggaatatgtacagaatcatgcaggtgca
gattactataacaattccaaggcgacgaatgcgaaggcaacacttaatgcgcttacctct
ttcaaagagcccatcgtgctgattgcaggtggccttgaccgtggatccgattatatggat
atgctggaagtgttcaaagagagagtgaaggctgtcgttttgctggggcaaacgaaggag
aagctggctgaagttgcgaaacttgccggtctaaaggatattcggattgtcgataatgga
gaggatgccgccgcagcgcttgtcgaagcggttaaaaatgcttccgagctggcacaatca
ggtgatgttgttttattgtcgcctgcatgcgcgagctgggatatgtttagctcctatgaa
gagcgtggacgcatttttaaagaggcggtgcataatctgtaa
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