Paenibacillus urinalis: PUW25_18825
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Entry
PUW25_18825 CDS
T08959
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pui
Paenibacillus urinalis
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pui03400
]
PUW25_18825 (addB)
Enzymes [BR:
pui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUW25_18825 (addB)
DNA repair and recombination proteins [BR:
pui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PUW25_18825 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
cobW
Motif
Other DBs
NCBI-ProteinID:
WDI01303
LinkDB
All DBs
Position
complement(4067571..4071098)
Genome browser
AA seq
1175 aa
AA seq
DB search
MPLHMMIGRAGSGKSTAIMNQITAQLHENPAGNPIILIVPEQASFQAESEMIRSQGVNGS
VRAQVLDFRRLSLRVMQETGGSALIPIRAEGKKMLLYKIMQKRKDELKIFSASGTQMGFA
HQLSSLYAEMKRYGTQEQSLKEELERVMEVPFAGAILHHKIHDILTVYRDFEEEVSRLYM
DEEDTLDKLAERIPSSDYVKQADVWIDGFRSFTPQELSVIRQLLLNANSVTISLTLDKPY
DAMNMPNEMNLFYSAGMSYVKLKGIAEDTAIECTTDHLPTDPSPSPRYAASALAHLEAGF
EGRRVRMKDAGHEGIHVFAAENRRAEVEGVLREIRRLAREEGVRYRDMAVLVRNLGDYGH
IVAPLFKDYDVPYFLDERRDELHHPLAELIRSALDVINRRWKYEDVFRAVKTDLLLPLDG
SVSRYDMDMLENYVLASGISGYRWTDGKPWKGVPSLSLEEDGPAGSELNRSRFLYLMEKC
RETIVSPLFTFEKRFKKAKTAKEQCIALFKLLEDADIARKLDALSSKALEEGSPEQAREH
RGIWTAVLDLLDQVVEMMGTEHLDAELFAGVIETGLAELKLGLIPPALDQVLVGSLDRSR
TGKVSHVFILGATDGVMPQIQQEEGVLTASERSVLTEYGMQLGPDVTRKMLDERFLIYAA
FTQASHSLWISYPLADEDGKSLHPSEMIRHLKRMFPGLEERPLLSRPGQAPEWKEQAGFL
LRPDLTMSYLMGELREWRRGKNIEESWWEVYNWYLAHPEMQVRLERMLESVFYKNRTRTL
TKETSFKLYGTQLKTSVSRMERFALCPFSHFVSFGLKLKERQVYRLKAPDIGQLFHAALS
KMAMKLKEQNLSWANLSREECVSYAEETVDVLAPQLQGEILLSTQRYGYIFRKLKNIVSR
ASIILGEQSRRGSFEPLALELDFGPDKPLPPLTFTLDNGVVMQIVGRIDRVDVAEGEDGE
ILLRVIDYKSSQTDLKLHEVFYGLSLQMLTYLDVLLTYAEEWIGTEAHPAGVLYFHVHNP
LLQSANGMGSEQAEQELLKRFKMKGLLLADREVIGKMDTSLEKGYSSILPVAVKTDGGFY
SSSSVATEEQWDMLLSSVRGTIQDIGTRITNGDVSISPYRMQQQSACTFCPLKSVCQFDE
SMPGSEYNLLKRPDKKQAWDLFNREGGEQAYEHDS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcatatgatgattggacgagccggcagtggaaaaagcacggccattatgaat
caaattacggctcagctgcatgagaaccctgcaggaaatcctataatccttatcgttccg
gaacaggcttccttccaggcagaatccgaaatgattcgttctcaaggcgtgaacggctcc
gtccgagcccaagtgcttgattttcgcaggctcagcttgagagtaatgcaggaaacggga
ggctcggctcttattccgattcgggccgaaggcaagaaaatgctgctctacaaaattatg
caaaagcgcaaggatgagcttaaaatattctctgcatcgggtacacaaatgggatttgcc
catcaactaagttccctgtatgcggaaatgaagcgatacggaactcaggaacaatctttg
aaggaagagcttgagcgagtaatggaggtgcctttcgcaggtgcgattctgcatcacaag
attcatgatattttaaccgtataccgggacttcgaggaagaagtatcccgattatacatg
gatgaagaagatacactggacaaattggcagagcgaatcccgtcctcggattatgtgaag
caggctgatgtttggattgacggcttccgcagctttactccgcaggagctctccgttatc
agacaattactgctgaatgcgaactccgtaaccatatcgctgactctggacaagccttat
gatgcgatgaatatgccgaatgaaatgaacttgttctactctgcaggcatgtcttacgtc
aaactgaaaggaatcgctgaagatacagcaatagaatgtactacagatcacttaccgacc
gatccctctccctcgcctcgttatgcagcttcggcgcttgcgcatctggaagcaggcttc
gagggccgccgcgtccgtatgaaggatgcaggtcatgaaggaattcatgtttttgcggcc
gagaacagaagagctgaggtcgaaggcgtcctgcgagaaatcagacgattggcaagagaa
gaaggagttcgttaccgggatatggcagtccttgtccgcaatctcggtgattatgggcat
atcgtcgcacccttgttcaaggattacgatgttccctatttcctggacgagcgcagagat
gagctgcatcatccgcttgccgagttgatcaggtccgctctggatgtcatcaatagacga
tggaagtatgaggacgtattccgggcggtgaagacggatctgctgctgcctctcgatggg
tccgttagtcgatacgatatggatatgctggagaactacgtgctggcatccggaatttcc
ggctatagatggacagacggcaagccgtggaagggagtgccgagtttgtccctcgaagaa
gatgggccagctggttctgagcttaatcgcagccggttcctgtacttaatggagaaatgt
cgtgagacgattgtatccccattgtttacctttgagaagaggttcaaaaaagcgaagacg
gccaaggagcaatgtatcgctctattcaagctgctagaggatgcagacatcgctcgtaaa
ctggatgcactgagcagcaaggcgctggaggaaggaagtcctgagcaggctcgggagcat
cgggggatctggaccgcggttctggatttgctggatcaagtcgtggaaatgatgggcacc
gagcatttggatgccgagctgtttgcaggagtcatagagacaggactggctgagctgaag
ctgggactgattcctcctgcactggatcaagtgcttgtcggaagtctggatcgatctcgg
acaggtaaggtcagtcatgtatttattcttggtgcaacagacggtgtcatgccgcaaatc
cagcaggaggaaggagttctaacggcttcggaaagatccgtgcttacggagtatggcatg
cagctaggtcctgacgtgacacgcaaaatgctggatgaacgcttcttaatctatgctgcg
tttacccaagcgagccacagtctatggatcagctatcctcttgcagatgaagacggcaag
tccctccacccttcagaaatgattcgtcatttgaagcggatgtttcctgggctggaggag
cgtccgctgctctcccggccgggacaagcacccgaatggaaggagcaagcaggcttcctg
cttcgtcccgacctaacaatgtcctatctgatgggtgagcttcgggaatggcgaagagga
aagaacatcgaggagtcctggtgggaggtatataactggtacctcgcacatccggaaatg
caggttcgacttgaacgaatgctcgaatctgtattttataagaaccgtactcgcacgctc
acgaaggagacgagcttcaagctgtacggaacacagctcaagaccagtgtatctcgtatg
gaacggtttgccttatgccctttctctcattttgtctcgttcggtctgaagctgaaggag
agacaagtgtatcgtcttaaggcccctgatatcggacagctgtttcatgcggcactcagc
aaaatggcgatgaagctgaaggagcagaacttaagctgggcgaacctcagccgtgaggag
tgcgtttcctatgcagaggagaccgtggatgtactagcacctcagctgcaaggtgaaatt
ttgctgagtacacagcgttatggatatatttttcgcaagctcaaaaatatcgtaagccga
gcttccattatactgggtgagcagtctagaaggggcagctttgaacccttggcactggag
cttgattttggtccggacaagccgctgcccccgctgacatttacattagataatggcgtt
gtcatgcaaattgtaggccgaattgaccgggtagatgtagccgaaggagaagatggcgaa
attttacttcgggttattgattataaatccagccagaccgatctgaagctgcatgaggtg
ttttacggtctgtcgctgcagatgctcacatatctggatgtattgctgacttacgcggag
gagtggatcggaacagaggctcatcctgcgggcgtgctctatttccatgtgcataatcct
ctccttcaatctgccaatggcatgggctccgagcaagctgaacaggagctgctcaagcga
tttaagatgaagggattattgctcgcggatcgggaagtgatcgggaagatggatacctct
ctggagaaaggatactcttcaatccttccggtcgccgtaaaaacggatggtggattctac
agcagctcgtcagttgcgacagaggagcagtgggatatgctgctgagctcggtacgcggg
acgattcaagatatcggaacacgaataacgaatggagatgtgtcgatatctccttatcgc
atgcagcagcaaagtgcctgtacgttctgtccgttgaaatcggtatgccagtttgatgag
agcatgccaggcagtgagtacaatttactcaagagaccggacaagaagcaggcttgggat
ttatttaacagggaaggaggagaacaagcatatgaacatgattcctaa
DBGET
integrated database retrieval system
