Paenibacillus urinalis: PUW25_23725
Help
Entry
PUW25_23725 CDS
T08959
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pui
Paenibacillus urinalis
Pathway
pui03022
Basal transcription factors
pui03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PUW25_23725
09124 Replication and repair
03420 Nucleotide excision repair
PUW25_23725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pui03021
]
PUW25_23725
03036 Chromosome and associated proteins [BR:
pui03036
]
PUW25_23725
03400 DNA repair and recombination proteins [BR:
pui03400
]
PUW25_23725
Enzymes [BR:
pui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PUW25_23725
Transcription machinery [BR:
pui03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PUW25_23725
Chromosome and associated proteins [BR:
pui03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PUW25_23725
DNA repair and recombination proteins [BR:
pui03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PUW25_23725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDI02167
LinkDB
All DBs
Position
complement(5120408..5122729)
Genome browser
AA seq
773 aa
AA seq
DB search
MPYEISISVRPLVEYVYRSGSITGGFRTNATMHEGTRIHQSIQKTYADTDQKEVFLKGEI
PCGDLLFKVEGRCDGLIQLDGAWTIDEIKSTAAPLEDLGDGLPVHWAQGKMYAYMYAKAE
GLSGMQIQLTYVRTGSGEQKRMLVTHSIEELEVFAREIVEAYAPYAEMLREHEEKRQPSI
EALGFPFPSYRAGQRKLAGAVFKTISEGAGLMAKAPTGIGKTMSTLFPAVKAVGAGHISK
IFYLTARTTTRATAEEAFARMQAQGLYMNSVTITAKDKICFKEEEACDAGQCRMCEGYYD
RINGAVLDIMKHETIMTRPVIEAYARKHQVCPFEYSLDIAYAADAVVCDYNYIFDPRVSL
KRLFEDQKKKTAVLVDEAHNLVDRGRNMFSAELVKSVFLGIKDEYKTANEGVSRTAGEVN
SFLYAVKNNCNSEGRIIQSELPEELIKRLEKFVETAEIELVSGSSADRVSLEAQEELLGT
YFAAQNFIRMAKLYDDHYLTYAEIIRSDFRIKLYCLDPSELLRQAGKGYRSIIHFSATLS
PMNYYRDMLGAGEEDYTLSIPSPFSKEQLDVRLVPLSVRYNDRERSKGAVARLLQRVAEE
RPGTNLLVFFPSYSYMQEVYEVYTQDEGKGVDAIIQQSSMSEEERDAFLSGFQPNPERTR
LGFAVLGGVFSEGVDLPGDRLNGVIVVGTGLPQIGLENNMLRDYFNQTGRNGFNYAYVFP
GMNKVLQAGGRLIRTEEDEGVLVLIDDRFAQEPYRSLLPEEWREYKQVNPASI
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccatatgaaatttcaatatccgtcagacctttggtggagtatgtatatcgaagcggc
agcattacggggggattccggacgaatgcgacgatgcacgaagggacccggattcatcag
agcattcaaaagacctatgcagatacggatcaaaaagaagtgtttctcaagggcgagatc
ccctgcggagatcttctattcaaggtggaagggagatgcgatggacttattcagctggac
ggggcatggacgattgatgagatcaagtcgacagcagctccgctggaggacttgggggac
gggcttccggttcactgggcacagggtaaaatgtatgcatatatgtatgccaaggcagag
ggactctcaggcatgcagatccagctgacctatgtacggacaggcagtggtgagcagaag
agaatgctggttacccactctatagaagagcttgaggtctttgcacgtgaaattgttgaa
gcttatgcaccttatgcggagatgttgagggagcatgaagagaagcgccagccgtccatt
gaagcgcttggctttccttttccttcttaccgtgcgggacaacgcaagctggcaggtgcc
gtattcaaaaccatctccgagggtgccgggctgatggcgaaggcgccgacaggaattggc
aagacgatgtcgactttattcccggctgtcaaggcagtcggagcaggacatatcagcaaa
atcttctatttgacggcgcggacaacgacccgggcaacggcggaggaagcctttgcgcga
atgcaggcacaggggctgtatatgaactcggtgacaatcaccgccaaggacaaaatctgc
ttcaaggaagaggaagcatgtgatgccgggcagtgcaggatgtgcgaaggatattacgac
cggatcaacggggcagttctggatattatgaagcacgagacgatcatgactaggccggtc
attgaagcgtacgcacgcaagcaccaggtctgcccattcgagtattcgctcgacattgct
tacgcggcggatgcggtcgtatgtgattataattatatttttgatccgcgagtgtccttg
aagcgattgtttgaggatcagaagaagaagacggctgtgctggtcgatgaggctcacaat
ctggtcgatcgaggccggaatatgttctcggcggagctcgtcaaatccgtctttctcggg
atcaaggatgagtacaagacggctaatgaaggggtatcccgaacggccggagaggttaac
tcgttcctgtacgcagtcaagaacaactgcaacagcgaggggcggatcattcagtctgag
ctgccggaagagctgatcaagcggctggaaaagttcgtagagacagcagaaattgagctg
gtctccggctcttctgcagaccgggtcagtcttgaggcgcaggaagagctgctcggcaca
tattttgcggcccagaactttattcgaatggccaagctatacgatgatcactacctgaca
tatgcggagatcatccgcagtgacttccgaatcaagctgtattgtctcgatccttcggag
ctgctacggcaggctggcaaaggctaccggtctatcattcatttctctgccacactgtct
ccgatgaattattaccgggatatgctgggtgctggcgaagaggattatacgctcagcatt
ccttcgccgttcagcaaggaacagcttgatgtgcggctggtaccgctgtcggtcagatac
aacgaccgggagaggtcgaagggagccgtcgcaagactgttgcagcgggtcgcagaggag
cggccggggaccaacctgctcgtctttttcccttcttattcctatatgcaggaagtatat
gaagtctatactcaggatgaaggcaagggtgtagatgccatcatacagcagtcttccatg
agtgaggaggagagggatgccttcctatccggcttccagccgaatcctgagcgcacgcgg
ctggggtttgcggtgctcgggggcgtattctccgaaggggtggatcttcccggtgacagg
ctgaacggtgtaatcgtcgtgggtacaggcctgcctcagattggactggagaacaatatg
ctgcgggattactttaatcagacggggcggaacggatttaattacgcttatgtttttccg
ggaatgaacaaagtgcttcaggcaggcgggagactcatccgtacggaggaggacgagggt
gtgctcgtgctgatcgatgatcgctttgcacaggagccttaccgttccttgctgcctgaa
gagtggagggagtacaagcaggttaaccctgcttcgatctag
DBGET
integrated database retrieval system
