Paenibacillus urinalis: PUW25_24665
Help
Entry
PUW25_24665 CDS
T08959
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pui
Paenibacillus urinalis
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PUW25_24665
Enzymes [BR:
pui01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PUW25_24665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
Motif
Other DBs
NCBI-ProteinID:
WDI02345
LinkDB
All DBs
Position
complement(5319031..5320662)
Genome browser
AA seq
543 aa
AA seq
DB search
MDNRFVKRMVSFFLILVMVGAAVLYPADKGYAATVYVTDNGTSIVVNTGSGLEYTVNKDN
GDITSAKMNGTELSSSGGKGSHIASGLGSAANVTWSKSPSGSTVLITVATDTLTHYYSSR
GGENTIYMATYVTAQPSVGELRYIFRGNGNVLTGVPANSNNRGTTGAIESQDVFGHSNGQ
TTSKYYGNDQAKDLTIRGATGNGVGVFMAYGNREKSSGGPFFRDIQFQSGGDTEIYNYMN
SGHAQTENWRMGLHGPYALVFTTGSTPAVPDFSWMSGLNLQGWVSSRGNVVLNGLSGMDS
AYTYTIGFANSNAQYWATASSSGSASKYGMIPGTYTMTVYKGELAVYTENVTVNANATTT
VNTRTINNDPSAASAIWRIGNWDGTPRELLNGQTIPVRHPSDSRNPSWGPVTYAVGGATN
KFPAIQFRGENSPTTVTFNLNSSQAASAHVLKIGITAAYNNGRPSVTINGNTLSNPAASS
QPNSRSFTIGTYRGNNATFTWNIPASYFNNGANTLTITPISGSSDLGNWLSAGWVYDAVE
LLN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatcgtttcgtaaaaagaatggttagtttctttctgatcttagttatggttggt
gcagcggtattatacccggcagataagggctatgcggcaacggtatatgttacggataac
ggcacttccattgtagtcaatacaggctcaggacttgagtataccgtgaataaggataat
ggtgatattacttcggccaagatgaatggcacagagctgagcagctcaggcggcaaaggg
tctcatattgcttcaggtctcggatcagctgcaaatgtgacttggagcaaatctccttcg
ggttctacggttctgattactgtagctaccgatacattaacccactattattcgtctcgc
ggcggtgagaatacgatctatatggcgacttatgtgacagctcagccgtcagtgggcgag
ctgcgctatattttccgtggtaatggaaacgttctcacgggtgtgccggcgaattctaac
aatcgaggaacaaccggtgctatagagagccaggatgtatttggacattcgaatggtcag
acaacctccaaatattatggtaatgatcaagccaaggatttaacgattcgcggagctaca
gggaatggagtcggtgtcttcatggcatatggcaatcgggagaagagctccggcggtcca
tttttccgtgatattcagttccagagcggcggcgatactgaaatctacaactatatgaat
tccggacatgcccagacagagaattggagaatggggcttcatggaccttatgccttggtc
tttacaacaggatctaccccggcagtacctgacttcagctggatgtcgggccttaatctg
cagggctgggtgtccagccgaggtaatgtagtgcttaatggtctatccggtatggattca
gcttatacgtacacgattggctttgcgaatagcaatgctcaatactgggcaacggcttct
tccagtggttctgcttcgaaatacggaatgatccctggaacgtatacgatgaccgtatat
aaaggggaactcgcggtatacacagagaatgtcactgtgaacgcgaatgcaacgaccacg
gtgaacacacggacgattaacaatgacccaagcgctgcttctgcgatttggcgtatcggg
aattgggatggcacaccgagagagctcctgaacggacagaccattccggtgcggcatccc
tccgacagtcgtaatccaagctggggacctgtaacgtatgccgtcggcggtgcaacaaat
aaatttccagcgattcagttccgcggagagaattctccaacaacggttacctttaatctg
aattcgtcacaggcggcctccgctcatgtgctgaagattgggatcacggcagcttacaat
aatggacgaccaagtgtgacgattaatggaaatacgctcagcaacccggcggcatcctcg
cagcctaattcccgcagctttacgattggcacttaccgggggaacaatgcgacctttaca
tggaatattccagcctcctacttcaataacggcgccaatactttgaccataacgccgatc
agcggttccagtgatttgggcaattggctgagcgcaggctgggtctatgatgccgtcgaa
ctgttgaattaa
DBGET
integrated database retrieval system
