Pullulanibacillus sp. KACC 23026: PU629_00880
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Entry
PU629_00880 CDS
T08861
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PU629_00880
09124 Replication and repair
03420 Nucleotide excision repair
PU629_00880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puk03021
]
PU629_00880
03036 Chromosome and associated proteins [BR:
puk03036
]
PU629_00880
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_00880
Enzymes [BR:
puk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PU629_00880
Transcription machinery [BR:
puk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PU629_00880
Chromosome and associated proteins [BR:
puk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PU629_00880
DNA repair and recombination proteins [BR:
puk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PU629_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Membralin
PhoH
Motif
Other DBs
NCBI-ProteinID:
WEG12941
LinkDB
All DBs
Position
complement(188303..190573)
Genome browser
AA seq
756 aa
AA seq
DB search
MTNRVMVSVRQLVEYVHRSGSIDAKFRTVTTMTEGTKAHQRVQKLYNAGDQKEVSLQIKL
SYEGLLFTIDGRCDGILFEEDTLVIDEIKSTNRQLELLEENEYPVHWAQAKCYAYIYASQ
NQQQQMTVQLRYVNLEEDEQRCFRQVWSIEDLEDFMLEMVAGFAPFAVLMKDHLTDRNES
IQALPFPFKSYRAGQRQLAGSVYKTIQEGRNLFANAPTGIGKTMSTAFPAVKAIGEGHIE
RFFYLTAKTITRTAAEDAFSLMQSNGLQLKTVTLTAKEKICFKEKAICQKEYCEFANGYY
DRLNEAMIDLLVNNHFIDRKTIEDYARKHTICPFEFSLDVAYQADAIICDYNYIFDPRVS
LKRYFEEQKKKAAILIDEAHNLVDRARDMYSASLKQTSFYSLEKLYKYKDETLYQVSRGI
NDYFLNMRKKVDSSGLVERDMPEDLVEKLEKFVETAESELLKEGQSDTKEELLDAYFAAQ
TFIRMSKLYDERYVTLSEIVNGDLHIRLFCTDPSFQLQQVSKGFRSKVFFSATLLPFQYY
LDMLGKEDEDYSLALSSPFPKENVQVVIHPLSTRYKDRERTRKKITELLKETINKRPGNY
LVFAPSYQYMDDLYDNFNRIKGKIETLLQDPNMAEEEREAFLNHFQPRVEGSFVGFSVLG
GMFSEGIDLKGDRLNGVFVIGVGLPQIGLERDVIKTHFDKMGKNGFDYAYVFPGINKVLQ
AGGRLIRSETDTGQITLVDDRFLTTNYQRLLPPDWR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcgtgtaatggtttcagttcggcaattagtggaatatgtgcatcgaagcggc
agtattgacgccaagtttcgcacggtgacaaccatgacagagggaaccaaagcccatcaa
agggtgcaaaagctttataacgccggggatcaaaaagaggtctctttgcaaatcaagctt
tcctatgaaggattgctgtttacaattgatggccgatgtgacggtattctttttgaagaa
gacacccttgtcatagacgaaatcaaatcgacaaacaggcagctagaacttctggaggaa
aatgaataccctgttcactgggcacaagccaaatgctatgcctatatttatgcaagccaa
aatcagcagcagcagatgaccgttcagcttcgttacgttaatttagaggaagacgagcag
cgctgctttcgtcaggtctggtccattgaggatttggaggattttatgcttgaaatggtc
gcaggctttgccccatttgcagtcctgatgaaggatcatttaaccgatcggaacgaaagc
attcaagccctcccttttccttttaaaagctatcgtgctggacaacgccaattagccggc
agtgtttataaaaccattcaagaagggcgaaatctctttgctaatgctcctacgggaatt
gggaaaacgatgtcgacggccttccctgctgtaaaagccattggagaaggtcatattgag
cgtttcttttatttaacagccaaaacgatcactcgaacagccgccgaggatgccttttcc
ctaatgcagtctaacggactccaattaaaaacggtcacattaaccgccaaggaaaaaatc
tgctttaaagaaaaagcgatctgccaaaaggaatattgcgagtttgccaatgggtattat
gaccgtttaaatgaagccatgatcgatttattagtaaataatcacttcattgatcgaaaa
accattgaagactacgcgcgaaaacatacgatctgtccatttgaattttcactggatgtc
gcctatcaagctgatgctattatctgtgactacaattatatttttgacccgcgtgtctct
cttaagcgctatttcgaggagcagaaaaagaaagccgcgattttgattgatgaagcgcac
aatctcgttgaccgagcgagagacatgtattctgcgtcactcaaacaaacaagtttttac
tccttggaaaagctttataaatataaagatgaaacactttatcaggtgagccgcggtatt
aacgattattttttaaacatgcgtaaaaaagtggactcaagtgggctagttgagcgggac
atgcctgaggatctggtggagaagttagaaaaattcgtagaaacggctgagtctgaactg
ctaaaagaagggcaaagtgatactaaagaagagcttctcgatgcctattttgccgctcaa
acatttattcgaatgtccaagctttatgatgagcgatatgtcacattatccgagatcgta
aacggggatctccacattcgtttgttctgcacggacccctcctttcaattgcagcaagtg
agtaagggatttcgttcaaaggtattcttctccgctacgctcttaccctttcaatattat
ttagacatgttgggaaaggaagatgaagactatagccttgccctttcttccccttttcca
aaagagaatgttcaggtcgtgattcaccccctatccactcgttataaggatcgcgagcgg
actagaaagaaaattaccgaactcttaaaagagaccatcaataagcggcctggcaattac
ttggtctttgctccgtcctatcaatacatggacgatctgtatgataatttcaatcggata
aagggaaagattgagaccctcttacaagatcctaatatggctgaagaggagcgcgaagca
tttttaaaccatttccaacctagagtagaaggctcttttgtaggtttctcagttcttggg
ggaatgttctcagaaggaattgacttgaagggagaccgtttgaacggggtttttgtaata
ggcgttggtctcccgcaaattggcctcgaacgtgatgtgatcaaaacccactttgataaa
atggggaaaaacggatttgactatgcctatgtctttcccggaattaacaaagtgcttcaa
gcaggcggacgattgattcgctcagaaacggacactgggcaaattactttggttgatgac
cgctttctcacaaccaactatcaaagactcttaccgccggattggcgatga
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integrated database retrieval system
