Pullulanibacillus sp. KACC 23026: PU629_04515
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Entry
PU629_04515 CDS
T08861
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk02020
Two-component system
puk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PU629_04515 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PU629_04515 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puk03021
]
PU629_04515 (rpoN)
Transcription machinery [BR:
puk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PU629_04515 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
RGI1
HTH_IclR
HTH_38
MarR
HTH_3
HTH_Crp_2
HTH_11
HTH_23
HTH_20
MarR_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WEG13636
LinkDB
All DBs
Position
1031044..1032357
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AA seq
437 aa
AA seq
DB search
MELKQTLQQQMKMAPMLFEAISLLQYNQVDLNAFLKEKTLENPLLDYQEADIYADSSFNK
RGTGVSATDVLENTMTKAESFREDLKQQIRVHPLSELNQACAFNMVDNLNDKGYWVEDTK
EWALTMGYPVEEVEASLRLLQSLEPAGVGATSLQHCLLLQAERLIEEEELSSIVQALIQD
YLAFLADEDWEALSEQMGISIPILLEAYERIKQLSPYPITEMNPEPIQFIIPDLLLEERE
GRFRLKVDLAVQPKLTINRDYYNQLLDATRETKERSYVHQKFSEAEWLLRGLNKREETLF
RIAEALSRFHASSFAFPPEKWMPLTLKEIADQLDLHESTISRAVKGKYVRTPYGILELKR
FFPKGVRPFGTHGLSSDHIKSLMRERIINEDPSNPLSDQVLANWFRTEHDLSLSRRVIAK
YRTELGIESSMKRRQRK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaagcagacgcttcagcagcaaatgaaaatggcaccgatgttatttgaggct
atttcacttctacaatataaccaggtcgatcttaacgcttttttaaaggaaaagacgctt
gagaatcccttgctcgactatcaagaagctgatatttatgcggattcgtcatttaataag
agaggaaccggtgtatcggctactgatgttttagaaaacacgatgacaaaagcagagtcc
tttcgagaggatttgaagcaacaaattcgcgttcatccactcagtgaattgaatcaggct
tgtgcctttaatatggttgataatcttaatgataaaggttattgggtggaggatacgaaa
gagtgggcgctcacaatggggtaccctgttgaagaggtggaagcttctcttcgccttttg
caatccttagaaccagcaggagtgggagccactagtttacagcattgtctcttgctccaa
gctgagagacttatagaggaggaggagctctcttctattgttcaggcattgatccaggat
tatttagcgtttttggctgatgaggactgggaggcgctgagtgaacagatgggaattagt
atcccgattctcttagaggcctatgagaggattaagcagttatccccttaccctataaca
gaaatgaatccagagcctattcaatttatcattcccgatcttcttttagaagaaagagag
gggcgctttcgtttaaaagtggatttagcggtacagccgaaattaacgataaaccgagac
tattacaatcagttactggatgctactcgtgaaaccaaagagagaagttatgttcatcaa
aaattctctgaagcagagtggttgcttagaggacttaataagagggaggaaacccttttt
agaatcgctgaagctctttcgcggtttcatgcctcctcatttgcctttcctccggagaaa
tggatgccgctgacattaaaagaaatcgcggaccaacttgacttacatgaatcaacaatt
agtcgtgcggttaagggcaaatatgtcagaacaccctatggaatattggagctcaagcgt
ttctttccaaagggagtccgtccgtttggcactcacggattgtcatccgaccatataaaa
agtctaatgcgagaacggattatcaatgaagacccttctaatccgttatccgaccaggtc
ctcgccaattggtttcgaactgaacatgatctgagcctctcaagacgagtgattgccaag
tatcgaacggagcttggaattgagtcttctatgaaacgacgccagcgaaagtaa
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