Pullulanibacillus sp. KACC 23026: PU629_06915
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Entry
PU629_06915 CDS
T08861
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PU629_06915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_06915
Enzymes [BR:
puk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PU629_06915
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PU629_06915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_22
AAA
TsaE
AAA_16
AAA_25
AAA_29
AAA_28
nSTAND3
UvrD_C
T2SSE
DUF4926
NTPase_1
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
WEG14091
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All DBs
Position
1536550..1538952
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AA seq
800 aa
AA seq
DB search
MSNPTSLDLFSEELPFIIGVPYHLIFQNSENAYTVMKVKIEETNISLPEKDIVVIGYFPA
LHLQESYHFFGNVKVHPRYGHQFEVERFRKLLPQSKAGIVHYLSGDLFPGIGKATAERIV
SALGEQAISKILENPDCLTEVPKLAADKATLIYEALLKHEGLEKVMIGLTDYGFGPRLSM
KIYQAYGNEALTIIEENPYRLVQDIEGIGFHRADELGKQYGLTGEHPDRIQAGILYVLNE
AAMNNGHVYLPKESVLQNATLLLSTPREPVSDEGIERELIVLHEEGKAILEEDRFYLPSL
YFAEKGLVSSLKRLMEQSEFQQNFSEAEFLAALGGLEDRLAIEYAPSQKAAIQQALASPV
TLLTGGPGTGKTTVIKGIVDIYAELHGLSLNPKDYKDEPFPFVLIAPTGRAAKRMSESTG
LPAVTIHRLLGWKGGSGYEHDEENPLEGRLVIVDEMSMVDIWLANHLLRSLKTPVQIVIV
GDEDQLPSVGPGQVLNDLLHSHVLPTVRLTDIYRQAEGSSIIELAHAIKNGEQVIELQQA
KEDRRFFACSQSQILDVVQKVCANAHKKGFSSKDIQVLAPIYRGNAGIDALNKVLQDLFN
PKHESKRFLTFGETEFRVGDKVLQLVNNPEDNVFNGDIGEVVALFKANERTEKEDALVVS
FDGIEVTVSRKDLGQLTLAYCTSIHKAQGSEFPIVVLPIVKGYHRMLRRNLIYTAITRSR
SYLIMCGDADAFMRAIQQTEGDRRFSHLKEKLIERLGAEREEEERSESEKAAVDSLQSSD
PDDWEIDETLNEEEDPFLNL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccaacctcccttgatctgttttcggaagaactcccctttatcataggggtt
ccttaccatcttatctttcaaaacagtgagaatgcctatacggttatgaaggtaaaaatt
gaagaaaccaatataagcctccctgaaaaggatattgtggttatcggctattttcccgct
cttcacctacaggaatcgtatcattttttcggaaacgtgaaagtgcatcctcgttatggg
catcaatttgaagtggaacggtttcggaagctgctgccccaatcaaaagcaggcattgtt
cattatctgtcgggtgatttgtttcctggaattggaaaagcgaccgctgaacgcattgtc
tcagcacttggggaacaggcgatttcaaaaattctggagaacccggattgtttgacagaa
gtgcctaagcttgcggcggataaagcgaccttaatttacgaagcgctcttaaagcatgaa
ggcttagagaaagtgatgattggccttacggattacggtttcggtccccggttatcgatg
aaaatctatcaagcctatgggaatgaagcactgaccattattgaggagaatccttaccgg
cttgttcaggatattgaagggattgggtttcatagagcggatgaactggggaagcaatat
gggttgaccggtgagcatcccgatcgtatccaagcgggtatcttgtatgtgttaaatgaa
gccgccatgaacaatggccatgtctatcttcctaaggagtccgttcttcaaaatgcaacc
cttttactgtcgacaccccgcgagcctgtaagtgatgaaggaattgaacgggaattgatc
gtgcttcatgaggaaggcaaggcgatattggaggaggaccgtttctatcttccttctctc
tatttcgctgaaaaagggctcgtatcaagtctgaaacggttaatggagcagtctgagttc
cagcaaaatttctctgaagcggagtttttggctgcgttaggcggtcttgaggaccgtctc
gctattgaatatgcgccttctcaaaaagctgccattcaacaggcgttagcctctccggtg
actctcttgacaggggggccagggactgggaaaacgaccgttattaaggggattgtggac
atctatgccgaacttcatggtctctcgttgaatccaaaagattacaaagatgagcccttt
ccttttgtcttgattgcaccgacaggacgggcagccaagcgcatgagtgaatcgacagga
ctgcctgctgtcacgattcaccgtcttcttggctggaaaggcggctcgggttatgagcat
gatgaagagaatccactggagggacgcttagttattgttgatgagatgtccatggtagat
atttggctcgccaatcatttattgcgctcattaaagacgcccgtacaaatcgttattgtt
ggagatgaagatcagcttccttcggttggacctggccaagttctgaatgatctgcttcat
tcacatgttttgccgaccgtcaggctgaccgacatctatagacaagctgaagggtcttct
attatcgaacttgctcatgccatcaaaaatggggagcaagtgatcgaactgcagcaggct
aaagaggatcgtcgattttttgcctgctcacaaagtcaaatcttagatgttgtccaaaag
gtatgtgccaacgctcataagaaggggttttcatcgaaggatattcaagtactggctccg
atctataggggcaatgcggggattgatgctttaaataaggtccttcaagatttgtttaac
ccaaagcatgaatccaagcgttttttaacatttggtgagacggagtttcgggttggagat
aaagtgctccaactggtcaataacccagaggataatgtttttaatggggatattggtgaa
gtggttgcccttttcaaagcgaatgagcgaacggaaaaagaagatgcgctagtggtgtct
tttgatgggattgaagtgaccgtttcccgcaaagatttggggcaattaaccctcgcttat
tgtacttcgattcataaggcgcaaggaagtgagtttccaattgtcgtcttgcctatcgta
aaaggctaccatcgcatgctaaggcgtaatttaatctatacagctattactagaagccga
tcctatttgatcatgtgcggcgatgcagatgcttttatgagagccattcagcagacagaa
ggggatcgccgcttctcccacttaaaggaaaaattgattgaacgacttggagcagagagg
gaagaagaggagcgatctgaaagcgagaaagctgcagtggactcacttcaatcctcagat
cctgatgattgggaaatagatgagacgttaaacgaggaagaagacccattcttaaatcta
taa
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