Pullulanibacillus sp. KACC 23026: PU629_07560
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Entry
PU629_07560 CDS
T08861
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03030
DNA replication
puk03430
Mismatch repair
puk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PU629_07560 (holA)
03430 Mismatch repair
PU629_07560 (holA)
03440 Homologous recombination
PU629_07560 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puk03032
]
PU629_07560 (holA)
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_07560 (holA)
Enzymes [BR:
puk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PU629_07560 (holA)
DNA replication proteins [BR:
puk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PU629_07560 (holA)
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PU629_07560 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Dimerisation2-like_dom
HTH_23
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
WEG14212
LinkDB
All DBs
Position
1638329..1639354
Genome browser
AA seq
341 aa
AA seq
DB search
MGTVISKGWTIKPPFQPVYLFYGTQSFLIKRLRKSIADQAVDPADRDFNLSVYDLTETPI
EVAIEDAMTLPFLGENRVIVLENPIFLTGDTKKTKVEHNLDVFSEYIENPSPSTILIVEA
PYEKLDKRKKVVKLLESKGVVLELNQVGEKELYDLLKSEAAQFQAVYTEAAHERLMALVG
FHVAQLINEVQKLSLYVGEDGEIDTAAVDLLATRSIESNVFDMVDLIMRGKGAEAIQLLE
ELFKQKEEPIRLLALIMRQIRILLQTILLTKEGYSQKQIASRLKLHPYAVKIANEQGRRF
DIGQLKRALVWCSDTDYAMKTGQEEKQLSLQLLIHRISTIN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggggactgttattagtaaaggctggacgattaagccgccatttcaacccgtatattta
ttttacggtactcaaagctttttgattaaacgtttaaggaaatcaatcgcagatcaagcg
gtggatccagctgatcgagattttaatttatctgtttatgacttaacagaaacaccaatt
gaagtagcgattgaagatgccatgacgctgccttttttgggggagaatcgtgtgattgtt
cttgaaaatcctatttttttgacaggtgatacaaaaaagacaaaagttgagcataatttg
gatgtgttttcggaatacatagaaaatccttctccgagcaccattctcattgttgaagcg
ccttatgaaaaattggataaacgcaagaaggtcgtaaaacttcttgaatctaaaggggtg
gttttagaattaaatcaagtcggtgagaaagaactatacgatttattaaagtctgaagcg
gctcagtttcaagcggtttacacggaagcggcccatgagcgattaatggcacttgtaggc
tttcacgtcgctcaattgatcaatgaggttcaaaaattatctctatatgtgggagaggac
ggagaaattgataccgcggctgttgacttacttgccacccgttccattgaaagcaatgtt
tttgacatggttgatttaattatgagagggaaaggggcagaggcgattcagcttcttgaa
gagttgtttaaacaaaaggaagaaccgatccgtttattagccctcattatgcgacaaatt
cgcattttgttacaaactatattgctgacgaaagaaggctattctcagaaacagattgct
tctcgtttgaagctccatccttatgccgttaagatcgcaaacgaacaaggaagacgcttt
gatatcggccagcttaaaagggcattggtgtggtgttcggataccgattatgcgatgaaa
acagggcaggaagaaaagcaactcagcttacaattattaatccatcgcatttcgacaata
aattag
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