Pullulanibacillus sp. KACC 23026: PU629_11215
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Entry
PU629_11215 CDS
T08861
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PU629_11215 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puk03019
]
PU629_11215 (recQ)
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_11215 (recQ)
Enzymes [BR:
puk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PU629_11215 (recQ)
Messenger RNA biogenesis [BR:
puk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PU629_11215 (recQ)
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PU629_11215 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HHH
NMT1_3
UPF0122
Linker_histone
Motif
Other DBs
NCBI-ProteinID:
WEG10757
LinkDB
All DBs
Position
2405478..2407613
Genome browser
AA seq
711 aa
AA seq
DB search
MLNEARAVLKKTFGYENFRKGQESIIDRLLSGQDTVGIMPTGGGKSLCYQIPALLFPGVT
LVISPLISLMKDQVDALEEAGVPATFINSSLSSQEVQERLDVAASGGYKLIYMAPERLNV
PYFIEWLNRLPISLVAIDEAHCISQWGHDFRPSYRNIKQMIDRLREKPIVVALTATATPQ
VTQDICELLAIQESSVVQTGFGRDNLFFQVIKGQDSRKYIVQYLKKNPSESGIIYAATRK
LVEQLYQFLKEKGFKVGKYHAGLSEKEKIREQEAFLYDEVTVMIATNAFGMGIDKSNVHF
VIHYNMPKNIEAYYQEAGRAGRDGQASECILLYSPQDTQIQKFFIDQSETMNPVQKTREY
EKLQQMVGYCHTEGCLQSYILEYFGDTESAPCGHCGNCLDHRESVDVTREAQMILSCIKR
MKERFGKSLIAQVVTGANNQKIRQMKFNSLPTYGIMKNYNQKEASELIDFLTAEGYLKPT
SGAFPVLMLTNSGADVLLGKATVLKKEAVQAKQFAVDNALFEDLRTLRKQFSEKENVPPY
IIFSDASLREMSSKLPKTVEELLDIKGVGEQKLERYGQAFLAEIVNYCEENDVEKPKEKE
KTPSAPQMQIITTNKKSYEVTHDLYKDGYSLQEIADARAMSIITIQNHLEQASANHLEVD
WDRFINADYEEQITNAIHQIGTDKLKPLKEALPEEVDYFMIKAVIQKLKQG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacgaagccagagctgttttaaagaaaacatttggctatgagaattttcgaaaa
ggacaagaaagtattattgatcgtttgctttctggacaggatacagtggggatcatgccg
acaggtggcgggaaatccttgtgttaccagattcctgcacttctttttcctggcgtcaca
ttggtgatttcgcctcttatctctttgatgaaggaccaagtggatgcgctagaggaagca
ggagttccggccacttttattaatagttcattgtcaagtcaagaggtgcaagaacgcctt
gacgttgccgcgtcgggcggttacaagctgatttatatggcacctgagcgtttgaatgtg
ccttattttattgagtggttgaatcggctcccgatttcattggttgctattgatgaagcc
cactgtatttcacaatgggggcatgatttcaggccaagctatcgtaacataaaacaaatg
attgatcgcttgagagagaagcctatcgttgttgccttaactgcaacggcaactccccaa
gtcactcaagatatttgcgagctcctagcgatccaagaatcatcggttgtacaaaccggt
tttggccgcgataatctcttttttcaagtcatcaagggacaagactctagaaaatatatc
gttcagtatcttaaaaagaatccatcggagtctggcattatctatgcggcaacaagaaag
ctcgtggaacagctttatcagtttttaaaagaaaaaggctttaaggtcggtaaatatcat
gctggtttaagtgaaaaggaaaagattagagaacaagaagccttcttgtatgatgaagtg
acggttatgattgcaacaaacgcttttggaatgggtattgataaatccaatgtccatttt
gtgatccattataatatgccaaaaaatatcgaggcctattatcaagaagcagggcgcgct
gggcgtgatgggcaagcgagtgaatgcattctcttatactctccccaggacacgcaaatt
cagaagttttttattgatcaatccgaaacaatgaatcccgttcaaaagacacgcgagtat
gaaaaacttcagcaaatggtggggtattgccacacagaaggctgccttcaatcctatatc
ctcgaatattttggtgacacggaatcagctccttgtgggcattgcgggaattgcttagat
catcgcgagtcggttgatgtgactcgtgaagcacagatgatcctttcatgtatcaaacgg
atgaaggaacgctttggaaaatcgctgattgctcaagttgtaaccggagccaataatcaa
aagattcgacagatgaaatttaatagtctaccgacctatggcattatgaaaaactataat
caaaaagaagcttctgaactgatcgattttttaacagctgaagggtatttaaagccaaca
agtggtgcttttccggtgttaatgttaacaaattctggtgctgatgtactattaggcaaa
gcaaccgtgttgaaaaaagaggccgtacaggcgaagcaatttgcagttgataatgcattg
tttgaagatttgcgtactcttagaaagcagttttcggaaaaagaaaacgttccaccttat
atcattttttcagatgcgagtttgcgagaaatgagctccaagcttccaaagactgtggag
gaactattagatatcaaaggtgtcggtgaacaaaaattagaaaggtatggacaagccttt
ttagctgaaatcgtcaactattgtgaagaaaatgatgttgagaaacctaaggaaaaagaa
aaaacaccatccgcaccacaaatgcaaatcataacaaccaataaaaaatcctatgaagta
acgcatgacctttacaaagatggctattccttacaggaaatagctgatgcgcgagccatg
tcgatcatcaccattcaaaatcatctcgaacaggcgagtgctaatcatcttgaagtagac
tgggatcgttttattaatgctgattatgaagaacaaataacaaacgcgattcaccaaatc
gggacagacaaattaaagccgctaaaagaggcattacctgaagaagttgactattttatg
atcaaagctgtgattcaaaagctaaaacaaggataa
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