Pullulanibacillus sp. KACC 23026: PU629_14115
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Entry
PU629_14115 CDS
T08861
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03420
Nucleotide excision repair
puk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PU629_14115
03430 Mismatch repair
PU629_14115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_14115
Enzymes [BR:
puk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PU629_14115
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PU629_14115
MMR (mismatch excision repair)
Other MMR factors
PU629_14115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
EAP30
Motif
Other DBs
NCBI-ProteinID:
WEG11295
LinkDB
All DBs
Position
complement(3070423..3072723)
Genome browser
AA seq
766 aa
AA seq
DB search
MEKKRFFCRPMGAPGSVVPRAELADSQTSRQLVSESEWDAVYFRSLEETGIFLNKPQIEA
VRHYEGPLLTLAGAGTGKTSVLVCRTGYLMAIHNVDPRNILLVTFTSKAAGEMKERIAKL
PGLTRQKATQVEARTFHSFFLKIIRSRGFNQKILSNERVKQITIKQILKKMGVEDTYQPE
TLISILSSYKMNILTVEDLPSRTDEEKEVKRILSAYESWKRETDQIDFDDILTEAYRLLK
ETPSLLKMLQARFRYIMVDEFQDTNPLQYELVKMLAYPRHNLFVVGDDDQTIFSFNGANN
GIILNFDKAFPEAKTVTLDINYRSPNGIVGLGNTVIQHNKERKLKTLKSTKEEALTPQFL
RPVDTDQEAEWVIEAIKEKVLEGKSQYRDIAILHRTASSSRAIFEQLTLDGIPFVSYGAT
DQTFYEQWPVKMVVSYLRLAVDHHHFEAMEDLLPTLFINRDQGMRVIRENEAIQPKKYPL
IHLTAIHTLKGFQKDAIRDRIKLIKGLKDLEPVTAIKQIRSQFYDKYLEANDRQTPTVNK
ETLKEALDELETSAKRFKKISTFVELIDDMIRKNQEMVKLRSDVQADAVSLMTIHRSKGL
EFPVVYLIGASDGILPHSTALEANKMEERAVRDDKKNTVHQATEEERRLCYVAITRAQEE
LYISSPKVYRGKKADVSTFLLQAYPGENQDKTVGVKEKERRTSQASGTKLGKPDSTERPK
KTFLAWLCTSDSCHIWQKIITYEDTELEHKDCPLCQSKMVKGIKTF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagcgatttttttgtaggccaatgggggcgcccgggagtgtggttccgcgc
gcggagttggcggatagtcagacgagcaggcagttggttagtgagtctgaatgggatgct
gtttattttcgatctcttgaggagacaggtatctttttaaacaagcctcaaattgaagcg
gttcggcattatgagggaccgctgttaacgttagcgggggcaggaacggggaaaacctct
gtactggtgtgtcggacaggctatttaatggcgatccataatgtggacccgcggaatata
ttgcttgtcacctttacatcgaaagcagcaggggagatgaaggagaggattgcgaaactg
ccagggttaaccagacaaaaggcaactcaggttgaggcaagaaccttccattcctttttc
ttgaagataattcgaagcagaggctttaatcaaaagatattaagcaatgagcgtgttaag
cagattacgattaagcaaattttgaaaaaaatgggtgttgaggatacttatcagcctgag
acactgatttcgatattgtcttcttataaaatgaacatcttgaccgtcgaggatttgcca
agtcggactgatgaggaaaaagaagtgaagcgaattctctccgcttatgaatcgtggaag
cgagagaccgatcaaattgattttgatgatattttaacagaggcttatcgccttttgaag
gaaacaccttccttattaaaaatgctgcaggcccggtttcgctatattatggtcgatgaa
tttcaggataccaatccactgcagtatgaactcgtcaaaatgcttgcttatcctcggcat
aatcttttcgtggttggcgatgatgatcaaaccattttttcgtttaatggagctaataat
ggcattattttaaactttgataaggcgtttcctgaagccaaaacagtgacgcttgatatt
aattaccgctcaccaaacggcattgtcgggctgggaaatacagtcattcaacataataaa
gaaagaaaactgaaaaccctgaagtcaacaaaggaagaggcactcacaccgcaatttttg
cggccggtggatacagaccaagaggcggagtgggtgattgaggctattaaggaaaaggtg
ttagaagggaagagtcagtatcgggatatcgcgattcttcatcggacggcaagcagcagc
cgggcgatatttgagcaactgactcttgatgggattccattcgtttcttatggcgcaacc
gatcaaaccttttatgagcagtggccggttaaaatggttgtcagctatttaaggcttgcc
gttgatcatcaccattttgaggcaatggaagatctattacccactctcttcatcaatcga
gatcaaggcatgagggtcatccgtgagaatgaagctatacagccaaaaaaataccctctg
attcatttgactgccattcatacgcttaaaggctttcagaaggacgcgattcgcgatcga
attaagctcattaaagggttgaaagatttagagccagtgacggcaattaagcagatcaga
agtcaattttatgataaatacttagaagcaaatgatcgacaaacccctaccgttaataag
gaaacgctaaaggaagccttggacgaattagagacttcagcgaaacggtttaagaaaatt
tcaaccttcgtagagttgatagatgatatgatcaggaaaaatcaggaaatggtgaagttg
aggtcggacgttcaagcggatgccgtgtctctcatgacgatccatcgttcgaaaggcttg
gaattcccagtggtttatcttatcggagcgtccgacgggattcttccgcatagtacagcc
cttgaagcaaacaagatggaggagcgggcggttagagatgataaaaagaacactgtccat
caagccactgaagaagaacggcgactgtgctatgtagcgattacaagagcccaagaagag
ctttatattagttcaccaaaggtttatagagggaaaaaagcggacgtctcaaccttttta
ttgcaggcataccccggtgagaaccaagataagacggtgggagtcaaggaaaaagagcgg
aggacgagtcaggcgtcagggactaaattagggaaaccggactctactgagcgaccgaaa
aaaacgtttttggcctggctgtgcaccagtgactcgtgtcatatatggcaaaaaatcatc
acgtatgaagatacagagctcgaacataaggattgcccgctttgccaaagcaagatggtt
aaagggataaaaacgttttaa
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