Pullulanibacillus sp. KACC 23026: PU629_14710
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Entry
PU629_14710 CDS
T08861
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PU629_14710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puk03019
]
PU629_14710
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_14710
Enzymes [BR:
puk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PU629_14710
Messenger RNA biogenesis [BR:
puk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PU629_14710
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PU629_14710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WEG11407
LinkDB
All DBs
Position
complement(3178830..3180317)
Genome browser
AA seq
495 aa
AA seq
DB search
MLETLLKERYGFDKFRIGQKEVIEEVLQGRDVFAMLPTGTGKTLCYLFSGQVLGGLTLIV
SPLLSLMEDQVQQIKLTGEKRVAALNSFLSFEEKKRLLNSLDTLHFLFVSPEMLRMSSVV
EALKDNGVRLFVVDEAHCISQWGHDFRPDYLRLAEVKRCLGQPTCLALTATADNRVKQDI
KEQLDIKGCKEHVYSIDRPNIALKVEQVATHLQKFNRVTELVQELEGPGLIYFSSREVAE
QAAAWIQRKCGKTVRAAFYHAGLTSEDRLFIQHQFLNDQLDVLCSTNAFGMGLNKKNVRY
VIHFHYPQHLNAYVQEMGRAGRDGLPALALTLLAPDDHLLPEAMIERDFPSEASFDFIFH
HGKINGWTSLALYKAALESGSTETAARFVGEQSRRLDPDSFEKSRVILKRIIDERRNLKL
KDLRAMRQWLMTSTCLRRGLLKAYDEELNEQREPCCDRCGFDLERFSSNFQSTNSFPALI
EDWEQRLSALLPSNS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaaacccttttaaaagaacggtatggctttgataagttccgaataggtcaaaaa
gaagtgattgaagaggtgctgcaaggccgggatgtatttgccatgcttccaacagggacg
ggaaaaacgctttgttatttgttcagtggacaagttctaggcgggttaacgctcatcgtc
tcaccgcttctttccttaatggaagatcaagttcaacaaataaagctcactggtgaaaaa
cgagtggcggctttaaatagtttcctctcgtttgaggaaaaaaagagattgctcaactcc
ctcgatacgttgcattttttgttcgtgtctccagaaatgctgaggatgagcagtgttgta
gaggcgcttaaagacaacggtgttcggctcttcgtggtcgatgaagcgcactgtatttca
cagtggggacatgattttcggcctgattatctgcgactcgcggaagtcaagcgctgctta
ggacagcccacttgtttggcattgactgcaacagcggataatcgagtcaaacaagacatt
aaagaacagcttgacattaaaggctgtaaggagcatgtgtacagtattgatcggccgaat
attgctctaaaggttgaacaagtggcaacgcatttgcagaaattcaatcgtgtcacggag
ctcgttcaggagcttgaaggcccaggcctcatctatttctcaagccgtgaggtagctgag
caggccgctgcatggatccaaagaaaatgcggcaagacggttcgggctgccttttaccat
gcgggccttacaagtgaagaccggttgtttatccagcatcaatttttaaatgatcaatta
gatgttctgtgcagcacgaatgcatttgggatggggttaaataagaaaaatgtgcgatat
gtgattcattttcattatccgcaacatctcaatgcttatgtccaagagatggggagagct
ggtcgggacgggctgcctgcacttgcgctgacgctgcttgccccagacgatcatttattg
cccgaagctatgattgagcgggattttccaagtgaagcgagctttgattttattttccac
catggaaagataaatggctggacgagtctcgcgctttataaggcagcgcttgagagtggg
tcaacggaaacggctgctcgttttgttggcgaacaatccaggcggcttgatccagattcg
tttgaaaaaagtcgtgtgattttaaaaagaatcatagacgaacgcagaaacttaaaatta
aaggatttaagagcgatgagacaatggttgatgacatcgacctgtcttcggagagggctc
ttaaaggcctatgatgaagaacttaacgaacaaagagagccttgctgcgaccgttgcggc
tttgatttagaaaggttttcttctaattttcaaagcacaaattctttccccgcattaata
gaggattgggagcaacgcctttctgctctcttgccgtctaatagctaa
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