KEGG   Pullulanibacillus sp. KACC 23026: PU629_15685
Entry
PU629_15685       CDS       T08861                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
puk  Pullulanibacillus sp. KACC 23026
Pathway
puk03030  DNA replication
puk03430  Mismatch repair
puk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:puk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PU629_15685
   03430 Mismatch repair
    PU629_15685
   03440 Homologous recombination
    PU629_15685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:puk03032]
    PU629_15685
   03400 DNA repair and recombination proteins [BR:puk03400]
    PU629_15685
Enzymes [BR:puk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PU629_15685
DNA replication proteins [BR:puk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PU629_15685
DNA repair and recombination proteins [BR:puk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PU629_15685
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NI DNA_pol3_a_NII HHH_6 tRNA_anti-codon DNA_pol_A_exo1 DEDDh_C HHH_3 RNase_H_2 YlqD Zn_Ribbon_TF CDI
Other DBs
NCBI-ProteinID: WEG11586
LinkDB
Position
complement(3369828..3374144)
AA seq 1438 aa
MKERRRVVEGKTKQDRFRILLNQLNAPEEVVENYLKNGNIERLVVHQKEKKWHFHFQLET
PLPFHVYKWFHDQLTAAFQQIASVTFTILTQRQSPDPELFVSYWPEIVRRLEDHSPALSQ
RLRSQSLKLMDNRLVLEVANETEATALKRKLPALLQDIVPQLGLACPELTYQHRDIEEEL
NDFIKQRDEESETKALQAMEELKKKAEQQTQTTQPVGPLKIGYDIPEDPVIIKSIQEEER
RITIQGLVFDVEIRELRSGRTLALFKITDYTDSILCKVFLKDKEEAERFSHLKKGMWLKV
RGGVQNDTFVRDLVLMARDIEEVNPLIKKDLAPEGEKRVELHAHTTMSQMDAIATASDLV
QRAKSYGHSAIAITDHGVVQSFPEAYSAGKKHGVKILYGLEANLVDDGVPIAFNEQPIEL
AEATYVVFDVETTGLSAVYNKIIELAAVKIKNGDIIERFERFSNPHEPLSQTIIDLTGIT
DDMIANAPEIDEVLRDFHEFVGDAILVAHNAQFDMGFLNTGYIKMGLDKSPNPVIDTLEL
ARFLYPDMKNHRLNTLCKAFNIDLTQHHRAIYDTEATGYLLWKMVKDVIERGIVLHSQLN
DNMGKGNMKRIRPSHCTILAQNQTGLKNLYKLVSFSHIDHFYRVPRIPRSLLGKYREGLI
IGSGCSQGDVFEAMMQKSAEEAEKAAEFYDYIEVQPPAILQHLIERELVNDELALRDIIR
KLVDLGDKMDKPVVATGNVHYLDENDFLYRKILIASQSGNPLNRQKQPPVHFRTTDEMLE
EFSFLGEERAKQIVVTNTHHIAELIEEIRPVQDELFTPKIEGADEEVRDMSYREAHRRYG
ETLPEVVEKRLEKELNSIIGHGFAVIYLISHKLVVKSLNDGYLVGSRGSVGSSLVATMMS
ITEVNPLPPHYVCPNCKHSEFFLDGSVACGFDLPEKTCSECGTVYTRDGHDIPFETFLGF
KGDKVPDIDLNFSGEYQPVAHNYTKELFGEDYVYRAGTIGTVADKTAYGYVKGYESDFNL
HLRGAEIDRLASGFTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQYPADDQSSEWRTTHFD
FHSIHDNLLKLDILGHDDPTAIRMLQDLSGIDPKEIPTSDPEVMKIFSTTESLGVTEEQI
RSKTGTLGIPEFGTRFVRQMLEDTRPTTFAELVQISGLSHGTDVWLGNAQELVNNGTCVL
KEVIGCRDDIMVYLMHKGLDPSMAFKIMESVRKGKGLNDEWIGIMKEHGVPQWYIDSCLK
IKYMFPKAHATAYVLMAIRIAYFKVHHPILFYATYFSVRADDLDIDIMKRGATGILAKIE
EIEGKGLDASTKEKNLLTVLEIALEMCQRGFSFSSIDLYRSKATEFVIDGNRLIPPFNAL
SGVGTNAAINIVKAREDGEFLSKEDLQKRAKLSRTVVDYLDQHGCLAGLPESNQLSLF
NT seq 4317 nt   +upstreamnt  +downstreamnt
atgaaagaaaggagaagagttgtggaaggaaaaacaaagcaggatcgattcagaattctt
ctcaaccaattaaatgcccctgaagaagttgttgaaaattatttaaagaacgggaatatt
gagcgccttgtggtccaccaaaaagagaagaaatggcattttcattttcaactcgagacg
ccgcttccttttcatgtctataaatggtttcatgatcaattaaccgcggcgtttcaacag
attgcctcggttacttttacgatattaactcaaaggcagtcacccgatcccgaattgttt
gtgtcttactggccggagattgttagacggcttgaagatcattcacctgccttatcgcaa
agactaaggtcccaatctctgaaactcatggataaccgccttgttttagaagtggcgaat
gaaacggaagcgacggcattaaaacggaagcttcctgcactcttgcaagatatcgttcct
cagttagggcttgcgtgtcctgagttgacttatcagcaccgcgatattgaggaggaactt
aacgattttattaagcaaagagatgaggaatcggagaccaaggcccttcaagcgatggag
gagcttaagaaaaaggctgagcagcaaacacagacgactcaaccagttggtcctcttaag
atcggttacgatatccctgaagaccctgtgatcattaaaagtattcaggaagaagaacgc
cggatcaccattcaaggtcttgtttttgatgtggaaattcgtgagctgcgcagtgggcga
acactagctttatttaaaatcacggattatacggattccattctttgtaaggtgttctta
aaagataaagaagaagctgagcgtttttcacatctgaaaaaaggcatgtggctgaaagta
agaggcggagtccaaaatgatacctttgtcagagatttagttctaatggctcgtgatatt
gaagaagtcaatccgctaattaagaaagatctagctcctgaaggcgaaaaacgtgtcgag
cttcacgctcatacgaccatgagccaaatggatgcgattgcgacagcttcagatcttgtt
cagcgggctaaatcctatggacatagtgcgattgcgattaccgatcatggtgtcgttcaa
tcttttccagaagcctactcagcaggcaagaaacacggggttaagattctctatgggctt
gaggccaaccttgtggatgatggtgttccgattgcttttaatgaacaaccgattgaattg
gcagaggcaacctatgttgtttttgacgttgagacaacaggtctatcagcggtttataat
aaaatcatagaacttgcggctgtcaaaataaaaaatggggatatcattgaacgatttgaa
aggttttccaatccccatgaaccactttcgcaaaccattatcgacttaaccgggataacc
gatgacatgatcgcgaacgccccggaaattgatgaggtactgagggattttcatgagttc
gtcggcgatgcgattcttgttgcgcacaacgctcaatttgatatgggcttcttaaatacg
ggctatatcaagatggggttagacaaatcacctaatcctgtaattgacacattagaattg
gctcgttttctctatcctgatatgaagaaccaccggctgaatactttatgtaaagccttt
aatattgatttaacccagcatcaccgagcgatctatgatacggaagcgaccgggtattta
ctatggaagatggtaaaagatgtgattgaacgcgggattgttttacactcccagttaaac
gataatatgggtaaaggaaacatgaaacggattcgaccaagccattgcacgattctcgcc
caaaatcaaacagggctgaaaaatttgtacaaacttgtgtctttttctcatattgatcat
ttttaccgagttccccggatcccgcggtcgttattgggaaaatatcgggaaggtctaatc
attggctctggatgttcccaaggggacgtctttgaggcgatgatgcaaaaatcggctgag
gaggccgaaaaggcagctgaattttatgattatattgaagttcagcctcctgctatctta
cagcatttaattgaacgcgaactagtcaatgatgagctcgctttaagagatatcatccgc
aaattagtcgacttaggcgataaaatggataaaccggttgtcgcaacaggtaatgtccat
tatctagatgagaacgattttctttatcgtaaaatcttgattgcttcacaatccggaaat
ccattgaacagacagaaacagccgcctgttcattttcgaacaacggatgagatgcttgag
gaattttctttcttaggcgaagaacgagctaagcaaattgtggtgacgaatacacatcat
attgctgagcttatcgaagaaatcaggcctgtgcaggatgaactctttacaccgaaaatt
gaaggggcagacgaagaagttcgggatatgagctatcgcgaagcccatcgccgttatgga
gagacgctgccagaggttgttgaaaaacggcttgagaaggaactgaatagtattattggc
cacggctttgcggtcatttatttgatttcacataaactcgtggtcaaatcccttaacgat
gggtacctggtcggttcaaggggttcagttggttcctcgcttgttgccaccatgatgtct
attacagaggttaatccgttgccgccgcactatgtgtgtccaaattgtaagcactccgaa
ttcttcttagacggtagtgtggcctgcggctttgaccttcctgaaaaaacgtgttcagaa
tgtgggacagtctatacgcgggatggtcatgatattccatttgaaaccttcttaggcttt
aaaggagataaggttcccgatatcgatttgaacttttcgggtgaatatcagccggttgct
cataactacactaaagagcttttcggagaggattatgtctatcgtgctggaacaatcggt
acggtggcagataagacggcttatgggtacgtaaaaggctacgaaagtgattttaatttg
catttgcgcggtgcagagattgatcggttagcgtcaggctttaccggtgttaaacgaacc
actggtcagcatccgggcgggatcatagttgtcccggattatatggacatttatgacttt
tcaccgatccaatatccggcagatgatcagtcatccgagtggcggacgacgcactttgat
ttccactcgattcatgacaatttgcttaagcttgatattctgggacacgacgatccgacc
gctatccgaatgcttcaagacttgagcgggattgatccgaaagaaatcccgacatcggac
ccagaagtgatgaagatattcagcacgaccgaaagccttggtgtcaccgaagagcagatc
cgttcaaaaacaggtaccttagggatccctgagtttgggacacgatttgtccgccaaatg
cttgaggacactcgtccgacgacgtttgccgaattggtgcaaatttcggggctttctcat
ggaacggatgtgtggttaggaaatgcgcaagagcttgttaataacgggacttgtgtactg
aaagaagttatcggctgtcgtgatgatattatggtctatttgatgcataaaggcttagac
ccttcgatggcgtttaaaatcatggaatccgttcgtaaggggaaagggctcaatgatgaa
tggattggcataatgaaagaacatggagtgccgcagtggtacattgattcatgtttgaaa
ataaaatacatgttcccgaaagcccatgcgaccgcttatgtgttgatggcgattcggatt
gcctatttcaaagttcatcatccgatccttttttatgcgacgtatttctctgtacgcgca
gacgaccttgacattgacattatgaagcgcggcgcaacaggcattcttgccaagatagaa
gagattgaaggaaaaggtctggatgcttctactaaagagaagaacttgttaactgtatta
gaaattgctttagagatgtgtcaacgtggattttccttttcatcgattgacctttaccgg
tcgaaagcaactgaatttgtcattgatggcaatcgcctcatccctccttttaatgcctta
tcaggggtgggaactaatgcagcgattaacatcgtgaaggcccgtgaagatggtgaattt
ttatcaaaagaagatttgcaaaaacgtgcgaagctatcacggacggttgtggattatctc
gatcagcatggctgcttggcaggcttgccagaatcgaatcaattatcccttttctaa

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