Pullulanibacillus sp. KACC 23026: PU629_15685
Help
Entry
PU629_15685 CDS
T08861
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Pathway
puk03030
DNA replication
puk03430
Mismatch repair
puk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PU629_15685
03430 Mismatch repair
PU629_15685
03440 Homologous recombination
PU629_15685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puk03032
]
PU629_15685
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_15685
Enzymes [BR:
puk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PU629_15685
DNA replication proteins [BR:
puk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PU629_15685
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PU629_15685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
DNA_pol_A_exo1
DEDDh_C
HHH_3
RNase_H_2
YlqD
Zn_Ribbon_TF
CDI
Motif
Other DBs
NCBI-ProteinID:
WEG11586
LinkDB
All DBs
Position
complement(3369828..3374144)
Genome browser
AA seq
1438 aa
AA seq
DB search
MKERRRVVEGKTKQDRFRILLNQLNAPEEVVENYLKNGNIERLVVHQKEKKWHFHFQLET
PLPFHVYKWFHDQLTAAFQQIASVTFTILTQRQSPDPELFVSYWPEIVRRLEDHSPALSQ
RLRSQSLKLMDNRLVLEVANETEATALKRKLPALLQDIVPQLGLACPELTYQHRDIEEEL
NDFIKQRDEESETKALQAMEELKKKAEQQTQTTQPVGPLKIGYDIPEDPVIIKSIQEEER
RITIQGLVFDVEIRELRSGRTLALFKITDYTDSILCKVFLKDKEEAERFSHLKKGMWLKV
RGGVQNDTFVRDLVLMARDIEEVNPLIKKDLAPEGEKRVELHAHTTMSQMDAIATASDLV
QRAKSYGHSAIAITDHGVVQSFPEAYSAGKKHGVKILYGLEANLVDDGVPIAFNEQPIEL
AEATYVVFDVETTGLSAVYNKIIELAAVKIKNGDIIERFERFSNPHEPLSQTIIDLTGIT
DDMIANAPEIDEVLRDFHEFVGDAILVAHNAQFDMGFLNTGYIKMGLDKSPNPVIDTLEL
ARFLYPDMKNHRLNTLCKAFNIDLTQHHRAIYDTEATGYLLWKMVKDVIERGIVLHSQLN
DNMGKGNMKRIRPSHCTILAQNQTGLKNLYKLVSFSHIDHFYRVPRIPRSLLGKYREGLI
IGSGCSQGDVFEAMMQKSAEEAEKAAEFYDYIEVQPPAILQHLIERELVNDELALRDIIR
KLVDLGDKMDKPVVATGNVHYLDENDFLYRKILIASQSGNPLNRQKQPPVHFRTTDEMLE
EFSFLGEERAKQIVVTNTHHIAELIEEIRPVQDELFTPKIEGADEEVRDMSYREAHRRYG
ETLPEVVEKRLEKELNSIIGHGFAVIYLISHKLVVKSLNDGYLVGSRGSVGSSLVATMMS
ITEVNPLPPHYVCPNCKHSEFFLDGSVACGFDLPEKTCSECGTVYTRDGHDIPFETFLGF
KGDKVPDIDLNFSGEYQPVAHNYTKELFGEDYVYRAGTIGTVADKTAYGYVKGYESDFNL
HLRGAEIDRLASGFTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQYPADDQSSEWRTTHFD
FHSIHDNLLKLDILGHDDPTAIRMLQDLSGIDPKEIPTSDPEVMKIFSTTESLGVTEEQI
RSKTGTLGIPEFGTRFVRQMLEDTRPTTFAELVQISGLSHGTDVWLGNAQELVNNGTCVL
KEVIGCRDDIMVYLMHKGLDPSMAFKIMESVRKGKGLNDEWIGIMKEHGVPQWYIDSCLK
IKYMFPKAHATAYVLMAIRIAYFKVHHPILFYATYFSVRADDLDIDIMKRGATGILAKIE
EIEGKGLDASTKEKNLLTVLEIALEMCQRGFSFSSIDLYRSKATEFVIDGNRLIPPFNAL
SGVGTNAAINIVKAREDGEFLSKEDLQKRAKLSRTVVDYLDQHGCLAGLPESNQLSLF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaggagaagagttgtggaaggaaaaacaaagcaggatcgattcagaattctt
ctcaaccaattaaatgcccctgaagaagttgttgaaaattatttaaagaacgggaatatt
gagcgccttgtggtccaccaaaaagagaagaaatggcattttcattttcaactcgagacg
ccgcttccttttcatgtctataaatggtttcatgatcaattaaccgcggcgtttcaacag
attgcctcggttacttttacgatattaactcaaaggcagtcacccgatcccgaattgttt
gtgtcttactggccggagattgttagacggcttgaagatcattcacctgccttatcgcaa
agactaaggtcccaatctctgaaactcatggataaccgccttgttttagaagtggcgaat
gaaacggaagcgacggcattaaaacggaagcttcctgcactcttgcaagatatcgttcct
cagttagggcttgcgtgtcctgagttgacttatcagcaccgcgatattgaggaggaactt
aacgattttattaagcaaagagatgaggaatcggagaccaaggcccttcaagcgatggag
gagcttaagaaaaaggctgagcagcaaacacagacgactcaaccagttggtcctcttaag
atcggttacgatatccctgaagaccctgtgatcattaaaagtattcaggaagaagaacgc
cggatcaccattcaaggtcttgtttttgatgtggaaattcgtgagctgcgcagtgggcga
acactagctttatttaaaatcacggattatacggattccattctttgtaaggtgttctta
aaagataaagaagaagctgagcgtttttcacatctgaaaaaaggcatgtggctgaaagta
agaggcggagtccaaaatgatacctttgtcagagatttagttctaatggctcgtgatatt
gaagaagtcaatccgctaattaagaaagatctagctcctgaaggcgaaaaacgtgtcgag
cttcacgctcatacgaccatgagccaaatggatgcgattgcgacagcttcagatcttgtt
cagcgggctaaatcctatggacatagtgcgattgcgattaccgatcatggtgtcgttcaa
tcttttccagaagcctactcagcaggcaagaaacacggggttaagattctctatgggctt
gaggccaaccttgtggatgatggtgttccgattgcttttaatgaacaaccgattgaattg
gcagaggcaacctatgttgtttttgacgttgagacaacaggtctatcagcggtttataat
aaaatcatagaacttgcggctgtcaaaataaaaaatggggatatcattgaacgatttgaa
aggttttccaatccccatgaaccactttcgcaaaccattatcgacttaaccgggataacc
gatgacatgatcgcgaacgccccggaaattgatgaggtactgagggattttcatgagttc
gtcggcgatgcgattcttgttgcgcacaacgctcaatttgatatgggcttcttaaatacg
ggctatatcaagatggggttagacaaatcacctaatcctgtaattgacacattagaattg
gctcgttttctctatcctgatatgaagaaccaccggctgaatactttatgtaaagccttt
aatattgatttaacccagcatcaccgagcgatctatgatacggaagcgaccgggtattta
ctatggaagatggtaaaagatgtgattgaacgcgggattgttttacactcccagttaaac
gataatatgggtaaaggaaacatgaaacggattcgaccaagccattgcacgattctcgcc
caaaatcaaacagggctgaaaaatttgtacaaacttgtgtctttttctcatattgatcat
ttttaccgagttccccggatcccgcggtcgttattgggaaaatatcgggaaggtctaatc
attggctctggatgttcccaaggggacgtctttgaggcgatgatgcaaaaatcggctgag
gaggccgaaaaggcagctgaattttatgattatattgaagttcagcctcctgctatctta
cagcatttaattgaacgcgaactagtcaatgatgagctcgctttaagagatatcatccgc
aaattagtcgacttaggcgataaaatggataaaccggttgtcgcaacaggtaatgtccat
tatctagatgagaacgattttctttatcgtaaaatcttgattgcttcacaatccggaaat
ccattgaacagacagaaacagccgcctgttcattttcgaacaacggatgagatgcttgag
gaattttctttcttaggcgaagaacgagctaagcaaattgtggtgacgaatacacatcat
attgctgagcttatcgaagaaatcaggcctgtgcaggatgaactctttacaccgaaaatt
gaaggggcagacgaagaagttcgggatatgagctatcgcgaagcccatcgccgttatgga
gagacgctgccagaggttgttgaaaaacggcttgagaaggaactgaatagtattattggc
cacggctttgcggtcatttatttgatttcacataaactcgtggtcaaatcccttaacgat
gggtacctggtcggttcaaggggttcagttggttcctcgcttgttgccaccatgatgtct
attacagaggttaatccgttgccgccgcactatgtgtgtccaaattgtaagcactccgaa
ttcttcttagacggtagtgtggcctgcggctttgaccttcctgaaaaaacgtgttcagaa
tgtgggacagtctatacgcgggatggtcatgatattccatttgaaaccttcttaggcttt
aaaggagataaggttcccgatatcgatttgaacttttcgggtgaatatcagccggttgct
cataactacactaaagagcttttcggagaggattatgtctatcgtgctggaacaatcggt
acggtggcagataagacggcttatgggtacgtaaaaggctacgaaagtgattttaatttg
catttgcgcggtgcagagattgatcggttagcgtcaggctttaccggtgttaaacgaacc
actggtcagcatccgggcgggatcatagttgtcccggattatatggacatttatgacttt
tcaccgatccaatatccggcagatgatcagtcatccgagtggcggacgacgcactttgat
ttccactcgattcatgacaatttgcttaagcttgatattctgggacacgacgatccgacc
gctatccgaatgcttcaagacttgagcgggattgatccgaaagaaatcccgacatcggac
ccagaagtgatgaagatattcagcacgaccgaaagccttggtgtcaccgaagagcagatc
cgttcaaaaacaggtaccttagggatccctgagtttgggacacgatttgtccgccaaatg
cttgaggacactcgtccgacgacgtttgccgaattggtgcaaatttcggggctttctcat
ggaacggatgtgtggttaggaaatgcgcaagagcttgttaataacgggacttgtgtactg
aaagaagttatcggctgtcgtgatgatattatggtctatttgatgcataaaggcttagac
ccttcgatggcgtttaaaatcatggaatccgttcgtaaggggaaagggctcaatgatgaa
tggattggcataatgaaagaacatggagtgccgcagtggtacattgattcatgtttgaaa
ataaaatacatgttcccgaaagcccatgcgaccgcttatgtgttgatggcgattcggatt
gcctatttcaaagttcatcatccgatccttttttatgcgacgtatttctctgtacgcgca
gacgaccttgacattgacattatgaagcgcggcgcaacaggcattcttgccaagatagaa
gagattgaaggaaaaggtctggatgcttctactaaagagaagaacttgttaactgtatta
gaaattgctttagagatgtgtcaacgtggattttccttttcatcgattgacctttaccgg
tcgaaagcaactgaatttgtcattgatggcaatcgcctcatccctccttttaatgcctta
tcaggggtgggaactaatgcagcgattaacatcgtgaaggcccgtgaagatggtgaattt
ttatcaaaagaagatttgcaaaaacgtgcgaagctatcacggacggttgtggattatctc
gatcagcatggctgcttggcaggcttgccagaatcgaatcaattatcccttttctaa
DBGET
integrated database retrieval system