Pullulanibacillus sp. KACC 23026: PU629_15750
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Entry
PU629_15750 CDS
T08861
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
puk
Pullulanibacillus sp. KACC 23026
Brite
KEGG Orthology (KO) [BR:
puk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puk03032
]
PU629_15750 (topA)
03400 DNA repair and recombination proteins [BR:
puk03400
]
PU629_15750 (topA)
Enzymes [BR:
puk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PU629_15750 (topA)
DNA replication proteins [BR:
puk03032
]
Prokaryotic type
DNA Topoisomerases
PU629_15750 (topA)
DNA repair and recombination proteins [BR:
puk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PU629_15750 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
HypA
Motif
Other DBs
NCBI-ProteinID:
WEG11597
LinkDB
All DBs
Position
complement(3387629..3389698)
Genome browser
AA seq
689 aa
AA seq
DB search
MEDYLVIVESPAKAKTIKRYLGNKYEVKASMGHVRDLPKSKMGVDIEGDFNPSYITIRGK
GPVLKELKQAAKKVKKVYLAADPDREGEAIAWHLAHSLEIDEASDCRVVFNEITKQAIKD
AFKKPRPINMDLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALKLIIEREK
EIQSFIPEEYWTITSQFSGDGETFEAAFYGINGKKLELKTEEEVKQVLEQIKGTAFNIES
VTKKERLRNPVAPFITSSLQQEAARKLNFRARKTMMVAQQLYEGVDMGRQGTTGLITYMR
TDSTRISEVARTETHAFIEEKYGKAYVGKGGQKSKNENAQDAHEAIRPTSVHYHPDEVKE
FLSKDQFRLYKLIWERFVASLMAPAVMDTVRADLVNNGVFFRATGSKIKFPGFMKVYIEG
NDDNTEEKENYLPELVENESVKMDEAEPKQHFTQPPPRYTEARLVRTMEEIGIGRPSTYA
PTIDTIQRRNYVVLEDKKFVPTELGEVVHQIMEEFFPEIIDVAFTAKMEDDLDAIEDGKT
DWIKIISSFYEEFEKRLEKAEKEMQAVEIKDEPAGIDCEKCGHEMVYKMGRYGKFLACSN
FPDCRNTKPILKEVGVTCPKCKEGNIVERKSKKRRKFYGCDHYPECDFISWDKPLARNCP
KCQSYLVEKKQKKGMVVQCSECDYKEEAQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaagattatctggtcatcgttgaatcaccagcaaaagctaaaacaattaagcgttat
cttggaaataaatatgaagtcaaagcctcaatggggcatgtacgtgatctcccaaagagt
aaaatgggagtcgatatagagggtgatttcaatccgagttatataaccattcggggtaaa
ggacccgttcttaaagaactgaaacaagcggccaaaaaagttaagaaagtgtatcttgca
gctgaccctgaccgtgaaggagaggccattgcttggcacttggcacacagtttagagatt
gatgaagcttcagattgccgcgttgtctttaacgagattacgaagcaagcgataaaagat
gcgtttaaaaaaccgcgtcccattaatatggatttggttgatgcccaacaagcgcgccgt
gttcttgaccgcttagtcggctataacatcagcccgcttttatggaaaaaagttaaaaaa
ggtttgagtgccggacgtgttcaatctgtcgctctaaaattgatcattgaacgcgagaaa
gaaattcagtcgtttattccggaagagtattggacgattacaagtcagttttctggagac
ggtgaaacatttgaggcggctttttatggaattaatgggaagaagctggaactcaaaaca
gaagaagaggttaaacaagttctcgaacaaattaaaggaaccgcttttaacattgaatcg
gttacgaaaaaggaacgcctccggaatccggttgctccgtttattacttcttccttacag
caagaggctgcacgcaaacttaattttagagccaggaagacgatgatggtcgcccaacag
ttatatgaaggtgttgatatggggagacaagggacaaccggtttaatcacttatatgcgt
actgactcaacccggatttccgaagtggctcgtacagaaacgcatgcctttatagaagag
aaatatggaaaggcgtatgttggtaaaggtgggcagaagagtaagaatgagaatgcccag
gatgcgcacgaagcgattcgtccgacatcggttcactatcatcctgatgaagtgaaagag
tttttatcaaaagatcagttccgtttgtataaattgatttgggaacggtttgtcgcgagc
cttatggcaccggctgtgatggatacagtgcgtgctgaccttgtcaataacggtgtcttt
tttagagcaacaggatccaaaattaagtttcctggatttatgaaagtctatatcgaggga
aatgatgataatacggaagagaaagaaaactatttgcctgagctcgttgaaaatgagtcc
gtaaagatggatgaggcagagccgaaacaacattttacacagccgccgccacgctataca
gaagcgcgtcttgttcggacgatggaagagatcggcattggtcgtccttctacgtatgcg
ccaacgatcgataccattcagcgtcgtaattatgtcgttttggaggataagaaatttgtt
ccgaccgaacttggtgaagtggttcatcaaataatggaagagttttttccagaaattatc
gatgtagcctttaccgccaaaatggaagatgatctcgatgcaatagaggacgggaagacg
gattggattaagattatttcatctttctatgaagagtttgagaaacgcttggagaaagcg
gaaaaggaaatgcaagccgttgaaattaaagatgaaccggctgggatcgactgtgagaag
tgtggacatgaaatggtctataagatggggcgttatggcaaattcctggcctgctccaat
tttccagactgtcgcaataccaaaccgattttgaaagaagttggggtcacctgtccaaaa
tgtaaagagggcaatattgttgaacgaaaaagcaaaaaacgccggaagttttatggttgc
gaccactatccggaatgcgattttatttcatgggataaaccgctcgcacgcaactgtcca
aaatgtcaatcttatttagtagaaaagaaacagaaaaaaggcatggttgttcaatgttct
gagtgtgattataaagaagaggcgcaatga
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