Pasteurella multocida subsp. multocida 3480: NT08PM_0002
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Entry
NT08PM_0002 CDS
T02057
Name
(GenBank) DNA polymerase III, beta subunit, putative
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03030
DNA replication
pul03430
Mismatch repair
pul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT08PM_0002
03430 Mismatch repair
NT08PM_0002
03440 Homologous recombination
NT08PM_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pul03032
]
NT08PM_0002
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_0002
Enzymes [BR:
pul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT08PM_0002
DNA replication proteins [BR:
pul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NT08PM_0002
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NT08PM_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
KH_SLS1_1
Motif
Other DBs
NCBI-ProteinID:
AFI45169
LinkDB
All DBs
Position
1390..2490
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AA seq
366 aa
AA seq
DB search
MQFIVSRENLLKPLQQVCGVLSSRPNIPVLNNVLLQIRGERLVITGTDLEVELSTETALL
RTDVQGSFTIPAKKFLDICRSLPEEAEISVSFEEDRAIVKSGRSKFNLSTLPAEEYPNLT
DWQSEVDFTLEQSTLRRLIEATQFSMANQDARYFLNGMKFETEGNLLRTVATDGHRLAVC
TIALEQDLQTHSVILPRKGVLELVRLLENTDLPARLQIGTNNLRIDLGNIIFTSKLIDGR
FPDYRRVLPRNATRILEAEWDVLKQAFVRAAILSNERFRSVRLQLSENQLKITATNPEQE
VAEEIIDVSYVGEEMEVGFNVSYILDVLNALKCQRVRMRLTDASSSCLIEDCDDASAEYV
IMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttattgtttcaagagaaaatttattaaagccattacaacaagtgtgtggggtg
ctaagtagccgcccaaatattcccgtattaaataatgtattactacaaattcgtggtgag
cgtttagtgattaccggcacggacttagaagttgagctctccactgaaactgcactatta
cgtacagatgtgcaaggtagttttactattcctgccaagaaatttttagatatttgccgc
agtttacccgaagaagcggagatctcagttagttttgaagaagatcgtgccattgtgaaa
tctggtcgcagtaaatttaacttgtcgactttaccagctgaagagtacccaaatttaact
gattggcaatcagaggttgattttactcttgaacaaagcacattgcgtcgtctgattgaa
gccacgcaattttccatggcgaaccaagacgcacgctatttcttaaacggcatgaaattt
gaaacagaagggaatttattgcgtactgtggcaacggatggtcaccgtttagccgtttgt
accattgcattagaacaagacttacaaacccattcagtgatactaccgcgcaaaggggta
ttagagttagtccgtttactcgaaaacacggatttgcccgcccgtttacaaattggtacg
aataacttgcgtattgatttaggcaatattattttcacttcaaaactgatcgatggtcga
ttcccagattatcgtcgtgtcttaccacgcaatgcaacacgtattttagaagcggaatgg
gatgtgttaaaacaggcgtttgtgcgcgcggcgattttatctaatgagcgtttccgtagt
gttcgtttacagttaagtgaaaatcaattaaaaattacggcaaccaatccagaacaagaa
gtggcagaggaaattatcgatgtttcttatgtgggtgaagaaatggaagtcggctttaat
gtaagctacattttagatgtattaaatgcgttaaaatgtcagcgagtgcgtatgcgtctg
accgatgcctcgtcaagttgcttaattgaagattgtgacgatgctagcgcggaatatgtc
attatgccaatgcgtttatag
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