Pasteurella multocida subsp. multocida 3480: NT08PM_0026
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Entry
NT08PM_0026 CDS
T02057
Name
(GenBank) primosomal protein N', putative
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NT08PM_0026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_0026
Enzymes [BR:
pul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT08PM_0026
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT08PM_0026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
ADDB_N
nSTAND3
SLFN-g3_helicase
cobW
DUF87
Sp-DndD
Motif
Other DBs
NCBI-ProteinID:
AFI45193
LinkDB
All DBs
Position
21194..23407
Genome browser
AA seq
737 aa
AA seq
DB search
MQLIRVALAVPLYRFFDYLLPPELDAVIGGRVVVPFGRQQRVGIVVALPVETEVETAQLK
SVIEVLDTQSLFNQDMWQLLHWAAGYYQTALGEVLFQALPVKLRQGESAVEKAKIFWQLT
ERGLQALAQHTDSGEFKRAKKQLEVLIVLSQTPLEKGNNPFNSAIFSTLKQKDYIEDVEV
QPQLHAWQTDFTDKPMVNDENRLRLNKQQALAFSQLVFHQGFAVWLLDGVTGSGKTEIYL
QLIEEVLKKGKQILVLVPEIGLTPQTVQRFAARFQVVIDVLHSNLNDTQRLAVWQRARTG
QSAVVIGTRSALFTQFADLGLIVIDEEHDASFKQQDNFRYHARDLSVVLAKRLNIPVLMG
SATPSLESLNNVHNGKYRHIILSNRAGNAALLRHSVIDLKQQVVRNGLSDALLQRMEKHL
QKGNQVLLFLNRRGFAPVMLCHECGWIAECQHCEKPYTYHQHQRALRCHHCAAQKPIPRQ
CEHCGSTHLITTGLGTEQLEQTLASRFPQYQITRIDRDSTARKGKLEDYLTDIQQGKSQI
LIGTQMLAKGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYVQVAGRAGRVEKQGEVV
LQTHYPDHPLLQRLLQQGYADFAEYALQLRQKMGLPPFSAQALFKAQSRHSEDAEQVLQQ
VAEYFYTWNQSSQCAIQILGPIAAPFSKKAGQYRWQLLLQHPSRAQLHYALSAFQATSTI
KFGSVRCVLDVDPIDLN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcatccgtgtggcactggcagtgccgttatatcgtttttttgattatctttta
cctcccgagcttgatgctgtgattgggggacgtgtcgttgtgccttttggtaggcaacag
cgtgttgggattgtggtggcattgcctgtggaaacagaagttgaaacggcgcaattaaag
tcagtaattgaggtgttggatactcaaagtttgtttaatcaagatatgtggcagttattg
cattgggctgctggctattatcaaactgcattgggtgaagtgttatttcaagcgttgcct
gtcaaacttaggcagggggaaagtgcggttgaaaaagcgaaaattttttggcaattgacc
gaacgtggtctgcaagcattggcacaacacactgacagcggggagtttaagcgggcaaaa
aaacagcttgaggttctcatcgtgttatctcaaaccccactagaaaaaggcaataatccg
tttaatagcgcgattttctcaactcttaaacaaaaagattacatagaagacgttgaggtt
caaccgcagttacacgcatggcagaccgatttcaccgataaaccgatggtgaatgacgaa
aatcgattacggctaaataagcaacaagcattagctttcagccaattagtgtttcatcaa
gggtttgcggtgtggttactcgatggtgtaacggggtcaggaaaaaccgagatttatttg
caactgattgaagaggtgttgaaaaaaggcaaacaaatattagtgcttgtgcctgaaatt
ggcttaacaccacaaacagtacaacgttttgccgctcgttttcaggtggtgattgatgta
ttgcattctaatctaaatgatacccaacgtttggcagtatggcagcgtgcaagaactgga
caaagtgcggttgtcatcggcacaagatccgcattatttacgcaatttgctgatttagga
ttgattgttattgatgaagagcatgatgcctctttcaaacaacaagacaatttccgttat
catgctcgtgacttgtcggttgtattggcgaaacggttaaatattccagtgttaatgggg
tcagcgacaccgagtttagaaagtctaaataatgttcataatggcaagtatcgccatatt
attttatcaaacagagcgggtaatgctgcattactacgtcattctgtgatcgacttaaag
caacaagttgtgcgtaatggcttatctgatgcgttgttacagcgaatggaaaagcaccta
caaaaaggtaaccaagtgttactttttttaaatcggcgtggttttgctcctgtgatgtta
tgccatgaatgtgggtggattgccgaatgccaacattgtgagaaaccttatacttatcat
caacatcagcgtgctttacgctgtcatcactgtgcggcacaaaaaccgattccgcggcaa
tgtgagcattgtgggtccacacatttgatcaccactgggttgggaactgagcaattagag
caaactttagcaagtcgttttccacaatatcaaattacgcgtattgatcgtgatagtacg
gcacgaaaaggcaaattagaggattatctcaccgatattcaacaggggaaaagtcagatt
ctgattggtacacaaatgctcgcaaaaggacaccattttcctaatgtgacgttggtggcg
ttagtgaacgtggatagtgccttattctctttagattttcgtgcagaagagcgcttggca
caactttatgtacaagtggcaggtcgtgcaggtcgtgtggagaaacaaggggaagtggtg
ctacaaacccactacccagatcatccattattacagcgtttgttgcagcaaggttatgca
gattttgcagagtacgcgttacaattacgacaaaaaatgggcttgccaccgtttagtgca
caagcattgtttaaagcacaaagccggcattcagaagacgccgagcaagtcttgcagcaa
gttgctgagtatttttacacttggaatcaaagctcgcagtgtgcgatacaaattttagga
ccgattgcggcacctttcagtaaaaaagctggtcaatatcgttggcaattattgctacaa
catccttccagagcccagttacactatgccttatcggcatttcaagcaacatcaacgatt
aaattcggttcagtacgttgtgtattagatgtggatcctattgatttaaattag
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