Pasteurella multocida subsp. multocida 3480: NT08PM_0107
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Entry
NT08PM_0107 CDS
T02057
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT08PM_0107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pul03019
]
NT08PM_0107
03016 Transfer RNA biogenesis [BR:
pul03016
]
NT08PM_0107
Enzymes [BR:
pul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NT08PM_0107
Messenger RNA biogenesis [BR:
pul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NT08PM_0107
Transfer RNA biogenesis [BR:
pul03016
]
Prokaryotic type
tRNA degradation factors
NT08PM_0107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_SLS1_2
aRib
Motif
Other DBs
NCBI-ProteinID:
AFI45269
LinkDB
All DBs
Position
88398..90542
Genome browser
AA seq
714 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFYNEIQIVATVVSVN
PQICPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDDQFVLNPTMNEQKQSRLDLVVAG
TDKAVLMVESEADVLTEEQMLAAVVFGHQQQQVVIDAIKEFTAEAGKPRWDWVAPEPNTA
LIEKVKAIAEARLGEAYRITEKQARYEQIDAIKADVIAQITAEVAEGEDISEGKVVDIFT
ALESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGT
ERDAQIIDELTGERSDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPTL
AEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVL
SDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITAEIMQIALNQAKSARLHILGVME
QAIPAPRADISDFAPRIYTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIA
AVDGNSAKEVMARIEDITAEVEAGAVYKGKVTRLADFGAFVSIVGNKEGLVHISQIAEER
VEKVSDYLAVGQEVTVKVVEIDRQGRIRLTMKEVAPKQEHVDSVVADVAAEENA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgttaaacaatttaaatatggtcaacatactgttacgctagaaacgggt
gcaattgcacgccaagcaacggcagcagtgatggcaagtatggatgatactactgtgttt
gtcacagtggttgccaaaaaagatgtgaaagaaggtcaagacttcttcccattaactgtt
aactatcaagagcgtacttatgctgcaggccgtattcctggtggctttttcaaacgtgaa
ggtcgtccttctgaaggcgaaactttaattgctcgtttaattgaccgtccaattcgtcct
cttttcccagaaggtttttataacgaaattcaaatcgtggcgacagtggtctcagtgaac
ccacaaatttgcccagatttagtcgcaatgatcggtgcatctgcagcactttctttatca
ggtgtgccatttaatggccctatcggtgcagcacgtgttggttttattgatgatcaattt
gtgttaaacccaaccatgaacgagcaaaaacaaagccgtttagacttggttgtcgcggga
acagataaagcggtgttaatggtggaatctgaagccgatgtgttaactgaagaacaaatg
ttagctgcggtggtgtttggtcatcagcaacaacaagtggtgattgacgcgatcaaagaa
tttaccgcagaagccggtaaaccgcgttgggattgggtggcacctgaaccaaataccgcg
ttaattgaaaaagtgaaagcgattgcagaagcgcgtttaggcgaagcataccgtatcact
gaaaaacaagcacgttatgaacaaattgatgcgattaaagctgatgtgattgcacaaatc
acagctgaagtggcagaaggcgaagacatcagtgaagggaaagttgtcgatattttcacc
gcacttgaaagccaaatcgtacgtagccgtattattgctggtgaaccacgtattgatggt
cgtacagtagatactgttcgtgcattagatatttgtactggtgttttaccacgtacacac
ggttctgcgattttcacccgtggtgaaacacaggcgttagctgtcgcgacattaggtaca
gaacgtgatgcacaaattattgatgaattaacaggtgagcgttcagatcactttttattc
cactacaacttcccgccatattctgtgggtgaaactggtatgattggttcaccaaaacgt
cgtgaaattggtcatggtcgtttagcgaaacgcggtgtagctgcggtgatgccaacactt
gccgagttcccgtatgtggtacgtgttgtctctgaaatcacagaatcaaatggttcttct
tctatggcatcggtttgtggtgcgtctttagcattaatggatgctggtgtaccaattaaa
gcggcggttgcaggtattgcaatgggcttagtcaaagaagacgaaaaatttgtggtgctt
tcagacatcttaggtgatgaagatcacttaggtgacatggacttcaaagtcgcgggaacg
cgtactggtgtaacggcattacaaatggatatcaaaatcgaaggtatcacagcagaaatc
atgcaaattgcgttaaaccaagcgaaaagtgcacgtttacatattttaggtgtgatggag
caagcgatccctgcgccacgtgcagatatttctgattttgcaccgcgtatttacaccatg
aaaattgatccgaagaaaatcaaagatgtgatcggtaaaggtggtgcaaccattcgtgcc
ttaacagaagaaacaggtacctcaattgatatcgatgatgatggtacagtgaagattgct
gcggttgatggcaattcagcaaaagaggtgatggcgcgtattgaagatattactgcagaa
gttgaagcgggtgcagtgtataaaggtaaagttactcgtttagctgattttggtgccttc
gtttctatcgtaggtaacaaagaaggtttagtgcatatttctcaaatcgcggaagagcgt
gttgagaaagtgagtgattatcttgcggtgggacaagaagtgactgttaaagtggttgag
attgatcgtcaaggtcgtattcgtttaaccatgaaagaagttgcaccaaagcaagaacac
gttgattctgttgtcgcagacgttgccgcagaagaaaacgcataa
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