Pasteurella multocida subsp. multocida 3480: NT08PM_0156
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Entry
NT08PM_0156 CDS
T02057
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03030
DNA replication
pul03410
Base excision repair
pul03420
Nucleotide excision repair
pul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT08PM_0156
03410 Base excision repair
NT08PM_0156
03420 Nucleotide excision repair
NT08PM_0156
03440 Homologous recombination
NT08PM_0156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pul03032
]
NT08PM_0156
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_0156
Enzymes [BR:
pul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT08PM_0156
DNA replication proteins [BR:
pul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NT08PM_0156
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NT08PM_0156
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT08PM_0156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AFI45318
LinkDB
All DBs
Position
complement(144942..147734)
Genome browser
AA seq
930 aa
AA seq
DB search
MAKIAENPLVLVDGSSYLYRAFHAFPPLTNSLNEPTGAMYGVLNMLKSLISQVQPSHIAV
VFDAKGKTFRDEIFEQYKSHRPPMPEELRSQILPLHNIIRALGIPLLVVEGVEADDVIGT
LAVQASRAGKKVLISTGDKDMAQLVDENIMLINTMNNTLLDREGVLEKYGLPPELIIDYL
ALMGDSSDNIPGIPGVGEKTALGLLQGIGSMAEIYANLDKVASLSLRGAKTLGAKLAEAK
DLADLSYLLATIKTDVALDVSPEQLTFGVANKDALIEYFARYEFKRWLNEVMNGGESSVT
NGSEQAVKTNPYQATPSANERENTVSVQIDRSQYQCLLELSELKRWIDKLNQAKCIAIDT
ETDSLDYMVAHLVGVSFALENGEAAYLPLRHDYLGAPQQVDFQTALSLLKPVLENPEIHK
VGQNIKYDLSIFARHGIEVQGVSYDTMLLSYVLDSTGRHNMDELAKRYLGHQTIHFEDIA
GKGKAQLTFNQIPLEQSAEYAAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVL
SRIERHGVLIDSDALFSQSQQIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLP
VLKKTPKGAPSTNEEVLEELAYEHALPKILVEHRGLSKLKSTYTDKLPLMVNKDTGRVHT
SYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIAPEGYQIMAADYSQIELRIMAHL
SQDKGLINAFNEGKDIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSSFGLSRQL
GIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQSSNAIRRK
AAERVAINAPMQGTAADIIKRAMITLDREIAEQPDIKMIMQVHDELVFEVHSDKIEHFRT
IIKTTMEQAAQLVVPLIVDVGVGKNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcgcagaaaaccctttagtcttagtggatggttcttcgtatctataccgc
gcatttcacgcatttccgcctttaacgaactcattaaatgagccaactggcgcaatgtac
ggtgtattaaatatgttaaaaagcctcatttcacaagtacaaccaagccatattgccgtg
gtttttgatgcgaagggcaaaacctttcgtgatgaaatatttgaacaatacaaatctcat
cgtcccccaatgcctgaggaattacgcagtcaaattctgccactgcacaatattattcgt
gccttaggcattcctttgttagtggtagaaggtgtggaagccgatgacgtcattggtacc
cttgcggtgcaagcctctcgtgccggaaaaaaagtcttaattagtaccggtgacaaagac
atggcgcagcttgttgatgagaatattatgctcattaacaccatgaacaacactttatta
gatcgcgagggagtacttgaaaaatatggtctgcctccagaattaatcattgattacctc
gcgttaatgggcgatagctcagataatattccgggaattccaggcgtaggtgaaaaaacg
gcgttaggtctgctacaaggcataggtagcatggctgagatttatgcaaatttagacaaa
gtcgccagtttatccctacgtggcgccaaaacattaggagcaaaattagccgaggcaaaa
gatctcgctgatttatcttatctactcgccactattaaaaccgatgttgcactggatgtc
agtccagaacaactgacttttggtgttgcgaataaagatgcgttaattgaatattttgct
cgttatgaatttaagcgctggcttaacgaagtgatgaatggaggagaaagctccgtcacc
aatggttcggaacaggcagtgaagaccaatccttaccaagccactccaagtgcaaatgag
agagaaaataccgtttctgtccaaattgaccgtagccaataccaatgtcttctcgaactc
agtgaattgaagcgctggatagacaagcttaatcaagccaaatgtattgcaattgatact
gaaacagacagtttagactatatggtggctcatttagttggggtatcttttgcgttagag
aatggtgaagctgcttatttaccattacgccatgattatcttggtgcacctcagcaagta
gattttcagaccgcactttctttgcttaaacctgttttagagaaccctgaaatccataaa
gtaggacaaaatattaagtacgatttaagtatctttgcccgtcacggtattgaggtacaa
ggcgtgagctatgacaccatgttactgtcttatgtgttagacagtactgggcgccataat
atggatgaattagccaaacgttatttaggtcaccaaaccattcactttgaagatatcgcg
ggtaaaggcaaagctcagctcacctttaatcaaataccacttgaacaatcggcggaatat
gcggcagaagatgccgatattaccatgaaattacagcaggtcttatgggaaaaagtggca
gcacagcctgaattagtgaagttatatcaaaccatggaactgcctttagcctcggtgctg
tctcgaattgaacgtcatggcgtgctcattgatagtgatgcactgtttagtcagtcgcaa
caaattggcgtaagattgaccgcacttgaacaacaggcgtatgaattggctggacaacaa
tttaatttggcctcaaccaaacagttgcaagagatcctgttcgataaattgagcttacct
gtcttgaagaaaacgcctaaaggcgcgccatcaacgaatgaagaagtcttagaagagctt
gcctacgagcacgccttgccaaaaattcttgtggagcatcgtggattaagtaaattaaaa
tccacttatactgacaaattaccgctcatggtgaataaagacacgggacgtgtacatact
tcctatcatcaggcggtaactgccacaggtcgtctttcatcgagtgatcccaatttacaa
aatattccgattcgcaacgaggaagggcgccgcattcgtcaagcctttattgcacctgaa
ggctatcaaattatggccgcggactattcccaaattgaactgcgaatcatggctcactta
tcgcaagataaagggctaattaacgcatttaatgaaggaaaagatattcaccgttcaaca
gcggcagagatctttggcattccattagcgcaagttagcagtgaacaacgtcgtagcgcc
aaagccattaactttggtttaatttatggcatgagttcatttggactttctcgtcaatta
ggcattccacgtcatgaagcacaaaaatacatggacttgtatttccaacgttaccccggt
gtacaagcctttatgcatgacattcgcgaaacagccaaagcacaaggttatgtaacaact
ttgtttgaccgacgcttatatttacctgatatccaatcttccaatgccattcgtcgcaaa
gcggctgaacgggttgctatcaacgcgccaatgcaagggacagcagcagatatcattaaa
cgagcgatgattactttagatcgtgaaatcgcagaacaacctgacattaaaatgatcatg
caagtacacgatgaattggtctttgaagtacactcagataaaatcgaacactttcgcacg
atcatcaaaaccacgatggaacaagctgctcaacttgtggtaccgctgattgtagatgtg
ggtgtgggtaaaaactgggacgaggctcattaa
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