| Entry |
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| Name |
(GenBank) ribonuclease, Rne/Rng family protein
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| KO |
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| Organism |
pul Pasteurella multocida subsp. multocida 3480
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT08PM_0239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pul03019]
NT08PM_0239
03009 Ribosome biogenesis [BR:pul03009]
NT08PM_0239
Enzymes [BR:pul01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NT08PM_0239
Messenger RNA biogenesis [BR:pul03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NT08PM_0239
Ribosome biogenesis [BR:pul03009]
Prokaryotic type
rRNA processing factors
NT08PM_0239
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
236500..239514
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| AA seq |
1004 aa
MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKANIYKGRITRVEPSLEAAFVDY
GAERHGFLPLKEIAREYFPDDYVYQGRPNIRDILSEGQEVIVQVNKEERGNKGAALTTFV
SLAGSYLVIMPNNPRAGGISRRIEGDERLELKDALSSLEVPDGVGLIVRTAGVGKSPEEL
QWDLKVLLHHWEAIKQASQSRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDSPKVYEKA
KAHIKLVRPDFIHRVKLYQGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTA
IDINSSRSTRGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVEN
RIRDAVRQDRARIQISRISRFGLLEMSRQRLSPSLGESSHHVCPRCQGTGKIRDNESLSL
SILRLIEEEALKENTKQVHTLVPVEIASYLLNEKRRAIHSIEKRHDVDVIVVPNEAMETP
HFGVFRVREGEEVHELSYNLVKLHQEKDEHFVPEESLVSRNIETAALTSENVLESAAVSM
AIPAPAPVPEKKVENKPSLLTRILAKLKAIFADKPVVEEKSKGNRPKSNRNRRQQERRNQ
RRSRAENVERDSNTKRQDEVVEEVIRPRSERNTKRNRKANHAVDTVSVTENTLDTATVES
VEVEKVESVAPRRQRRDLRKKVRISDDAHESALPLVETEISMPKAETVVEETVVATELVP
ETVSVVEEGETEKRRDNNRRRLPRHLRVNNQRRRRQNQEFKAPMPLFAAVASPELASGKV
WPDFQPVVVKENQFLSVDELLEQQHQPKESAATIPALDLVAEGSEKGVLPFNGFVVQPAN
ESVEKKVKQSLQRLEEEQALAIMQPLSVADTKIGEVEEKTEHKPLNDVSTELRVKEVEKN
RLPQSPVEEVVEQAEMPAQGDEVKSISRLQRNYQFNGRLGTISAVLHTTSEMTLAKASDE
PLEMCQIGVWSESRYYFHGKGSAGHHSAISHVYAGPTKAENKGE |
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| NT seq |
3015 nt +upstreamnt +downstreamnt
atgaaaagaatgttaatcaacgcaactcaaaaggaagagttgcgcgttgctctagtggat
ggacaacgtttatttgatttggatattgaaagtccaggtcatgaacagaaaaaagcaaac
atttacaaaggccgtattactcgtgttgaacctagtcttgaagccgcgtttgtggattat
ggtgccgaacgtcatggtttcttgcctttgaaagaaattgcacgtgagtattttcccgat
gattatgtctatcaaggacgcccaaacattcgcgatattttgagcgaagggcaagaagtc
attgttcaagtaaataaagaagaacgtgggaataaaggggctgcgttgacaacctttgtt
tctttagcgggaagttacttggtgatcatgccgaataatccgagagcaggcggtatttca
cgtcgtattgagggagatgaacgtcttgaattaaaagatgcattgagttctcttgaagta
ccagacggtgtgggattaattgtgcgtactgccggggtaggtaagtcaccggaagaatta
caatgggacttaaaagttttacttcaccattgggaagcaattaagcaagcctcgcaaagt
cgccctgcgcctttcctgattcaccaagaaagtgatgtgattgtacgagctattcgtgat
tacttgcgccgtgatatcggtgaaattttaattgatagccctaaagtgtatgaaaaagcc
aaagcgcatattaaattagtgcgtcctgactttattcatcgagtcaaactttatcagggc
gaagtaccgctgttcagccactatcaaattgaatcacaaatcgaatccgcgttccaacgt
gaagtgcgcttaccttctggtggctcgatcgtcattgatgtgacagaagccttaacggcg
attgatatcaactcatctcgttcgacgcgaggtggcgacattgaagaaaccgcgttaaat
actaaccttgaagctgcagatgaaattgctcgtcaactacgtttacgtgacttaggcggc
ttgattgtgattgatttcattgatatgactccagttcgccatcaacgcgaagtagaaaat
cgtattcgtgatgctgtacgtcaagatcgtgcacgtatccaaattagtcgtatttctcgt
tttggtttgttggaaatgtcacgtcagcgtttaagcccatcgttaggggagtcatcccat
catgtatgcccacgttgtcaagggacaggtaaaatccgtgataatgaatcactctctctt
tctattttacgtttaatcgaagaagaagcattaaaagaaaataccaaacaagtgcatacc
cttgtgccagtggaaattgcttcttatttattaaatgaaaaacgtcgtgcgattcacagc
attgaaaaacgtcacgatgtggatgtgattgtcgtaccaaatgaagcgatggagacccca
cactttggcgtgttccgtgtgcgtgagggcgaagaagtacatgagctcagttataattta
gttaaattacatcaagagaaagatgagcattttgtgcctgaagaatctcttgtgtcacgt
aatattgaaaccgcagctttaacaagtgaaaacgttttagaaagtgcggctgtttcaatg
gcaattcctgcaccagcacccgttccagagaagaaggtcgaaaataaaccgtctttattg
actcgcatactggcaaaattaaaagcaatttttgctgataaaccagtggtggaagagaag
tcaaaaggaaatcgtcctaagagtaaccgtaatcgccgtcaacaagaacgtcgtaatcaa
cgtcgttcacgtgcagagaatgtggagcgtgatagcaatacgaaacgtcaagatgaggtt
gttgaagaagtgattcgtcctcgttcagaacgtaatactaaacgtaatcgtaaggcaaat
catgcggttgataccgtatctgtaacggaaaatacattagatactgctaccgttgagagc
gttgaagtggaaaaagtggagtccgttgcgccacgtcgtcaacgtcgcgatctgcgtaaa
aaagtccgtattagcgatgatgcacatgaaagtgcactgccacttgtcgagacagaaata
agtatgcctaaagcagaaaccgtggttgaggagacggttgttgcaacagaacttgtgcca
gaaactgtgtctgtagttgaagaaggggaaacagaaaaacgccgtgataataatcgtcgc
cgtttacctcgtcatttacgtgtgaataatcaacgccgtcgtcgtcagaaccaagagttt
aaagcaccaatgccattatttgctgcggtagcttctccagagttagcaagtggtaaagta
tggcctgatttccaacctgttgtagtaaaagaaaaccaattcttatcggtagatgagtta
ttagaacaacaacatcagccaaaagaaagcgcagcaacgattcctgcacttgatttggtg
gcggaaggcagtgaaaaaggtgtattaccatttaatggtttcgttgtacagcctgcgaat
gagtcggttgaaaagaaagtcaaacaatcgttacagcgtttagaagaagagcaagcttta
gccattatgcaacctttatcggtagcagatactaagataggcgaagtagaagagaaaacc
gagcacaagccattaaacgacgtttcgacagaactccgtgtgaaggaggtggaaaaaaat
aggcttccacagtcgccagtagaagaagttgttgaacaagccgaaatgcctgctcagggg
gatgaagtgaagtctattagtcgcttacaacgaaactatcagtttaatggacgcttaggt
actatttcggcagtgctgcatacgacatcagaaatgacgctagctaaagcaagtgatgag
cctcttgaaatgtgccaaattggcgtgtggagtgagtcgcgttactatttccatggcaaa
ggttcagcagggcatcatagtgcgattagccacgtttatgcaggaccgacaaaagcggag
aataaaggcgaataa |
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