Pasteurella multocida subsp. multocida 3480: NT08PM_0463
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Entry
NT08PM_0463 CDS
T02057
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
pul
Pasteurella multocida subsp. multocida 3480
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pul03032
]
NT08PM_0463
03036 Chromosome and associated proteins [BR:
pul03036
]
NT08PM_0463
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_0463
DNA replication proteins [BR:
pul03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NT08PM_0463
Chromosome and associated proteins [BR:
pul03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NT08PM_0463
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NT08PM_0463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AFI45606
LinkDB
All DBs
Position
470136..470420
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLVQKCHAVAAKDVENAVKEILDQMSFALESGKRIEVRGFGSFSLHYRQPRL
GRNPKTGEQVKLDAKSVPHFKTGKELRERVDIYA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagagcttattgagcgtttagtccaaaaatgtcatgcagttgcggcaaaa
gatgttgaaaatgcagtaaaagagattttggatcaaatgtcattcgcattagaaagtggt
aagcgtattgaagtaagaggatttggtagtttctcattgcattatcgccaacctcgttta
ggacgtaatcctaaaacaggtgaacaagtgaaattagacgcaaaatctgtcccgcacttt
aaaacaggcaaagagctgagagagcgtgttgatatttacgcataa
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