Pasteurella multocida subsp. multocida 3480: NT08PM_0683
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Entry
NT08PM_0683 CDS
T02057
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pul03032
]
NT08PM_0683
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_0683
Enzymes [BR:
pul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NT08PM_0683
DNA replication proteins [BR:
pul03032
]
Prokaryotic type
DNA Topoisomerases
NT08PM_0683
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NT08PM_0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_LysW
Zn_Ribbon_TF
DUF7351
Toprim_2
Toprim_4
CEP104_ZnF
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AFI45818
LinkDB
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Position
708251..710857
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGSNYVVKSSVGHIRDLPTVGSSNGEKAKAISTKGLSAEE
KSAIKQEKDRNALVKRMGIDPYHQWKANYQILPGKEKVVAELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGDDARFSRVVFNEITKNAIQQAFEKPEQLNLDRVNAQQTRRFLDRV
VGXMVSPLLWKKVARGLSAGRVQSVAVKLVVEREREIKAFQPEEYWEIDVLTQTQAKQAL
RLAVTQFKGKKFEPKNATQAQSAVDFLQHADYVVSDLETKPTHSRAKAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALKMVRGYIQSHYGERYLPSKPVF
YSSKENAQEAHEAIRPSDVNTLAEQLTGMDKDAVRLYDLIWRQFVACQMPAAQYDSTTVT
VRAGEYELKAKGRILRFDGWTKVLPTMSKNAEDQVLPDVQLNEKLHLEHVLPEQLFTKPP
ARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRVENRRFYAEKMGEIVTDRLNQSF
TALMNYDFTANMENILDQIANGEKNWKTELNQFFKDFSQQLSQAELDELEGGMKPNSLVP
TDINCPTCGRKMAIRTASTGVFLGCSGYALPPKERCKTTMNLIPEAELLNVLDEASETKA
LMERKRCPKCGTAMDSYLIDPERKIHICGHNPNCDGYVLEQGSFKIKGYDGPIVECDKCG
ADMHLKLGRFGKYMGCTSCDNTRKILKSGEVAPPKEEPTHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRAPKVAELALYRDRLPEKLRYLADAPQHDPEGNDAIVRFSRKEKR
QYVTSEKNGKATKWIVDYLGNQWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttggttattgtggagtcgccggcaaaggcaaaaaccattaataaatat
ctaggcagtaattatgttgttaaatctagtgtgggccatatccgtgatctccctacggtc
ggttcaagtaatggtgagaaagcaaaagcaatttccacgaaaggattaagtgcggaagaa
aaaagcgcgattaagcaagaaaaagatcgcaatgcgttagtcaaacgtatgggaattgac
ccttatcatcaatggaaagccaattaccaaattttgcctggcaaagagaaagtggttgcc
gaattaaaatcattagccaaaaaagccgatcatatttatcttgcgaccgatttggataga
gaaggagaagccattgcttggcatttgcgtgaggtgatcgggggggatgatgcacgtttt
agtcgtgtcgtatttaacgaaatcacgaagaacgcgattcaacaagcctttgaaaaacca
gaacaactgaatttagatcgtgtaaatgcccaacaaacccgtcgctttttagaccgcgtg
gtcggttntatggtgtcgcctttattatggaaaaaagtagcccgaggcttatctgctggg
cgtgttcaatctgttgcggtcaaattagtagtagaacgtgagcgtgaaattaaagccttt
cagcccgaagaatattgggaaattgacgttttaacgcaaacgcaagcaaaacaagcatta
cgtttagccgtaacccaatttaaagggaaaaaatttgagccgaaaaatgccacgcaagca
caaagtgcggtagattttttacagcatgctgactatgtggtttccgatttagaaacgaaa
ccaacccattctcgagcgaaggccccttttattacctcgacattacagcaaaccgccagt
acacgtctagggtttggggtaaagaaaaccatgatgctcgcacagcgtttatatgaagcc
ggttatattacctatatgcgtacagactccacgaatttgagtcaagatgcgttaaagatg
gtgcgtggctatattcaatcacattatggcgaacgctatttgccgagcaaacctgtgttt
tattcaagtaaagaaaatgcacaagaagctcatgaagcaattcgtccatcggatgtcaat
acattagcagagcagttgacaggcatggataaagatgcggtacgtttatatgatctgatt
tggcgtcagtttgtcgcttgccaaatgccagcggcgcaatatgacagtacaacggttacg
gttcgcgcgggagagtatgaattaaaagcgaaaggacgtattttacgttttgatggttgg
acaaaagtcttacctacaatgagtaaaaatgctgaagatcaagtgttgccagatgtgcag
ctgaatgaaaaattgcatttagagcatgttttacccgaacagttatttaccaaacctcca
gcacgttttagtgaagcggcgttggtcaaagaacttgaaaaacgtgggattgggcgtccc
tctacatacgcagcaattatttcaacgattcaagaacgtggctatgtacgagtggaaaat
cgtcgtttttatgccgaaaaaatgggcgaaattgtcactgaccgtttaaatcaatctttc
acagcgttgatgaattacgatttcaccgccaatatggaaaatatcttggaccaaattgcg
aacggtgagaaaaattggaaaaccgaacttaatcaattctttaaagatttttcgcaacag
ttaagccaggcggaactggatgaattagaaggtggaatgaaaccaaatagtttagtccca
accgatattaactgtccaacttgtggtcgtaaaatggcaattcgcaccgcaagtactggg
gtgtttttaggttgcagtggttatgccttgccaccaaaagagcgctgtaaaactacaatg
aacttaattccagaagctgaattgctcaatgtgttagatgaggcttctgaaaccaaggcg
ttaatggaacgtaaacgctgtccaaaatgtggtacagcaatggacagttatctaattgat
ccagaacgtaaaattcatatttgcgggcataatccgaattgtgatggttatgtgttagaa
cagggcagtttcaagattaaaggctatgatggtccgattgtcgaatgcgataaatgcggt
gcggacatgcatttgaaattgggtcgttttggtaaatacatgggctgcaccagctgtgat
aatacccgtaagattctaaaaagtggggaagttgcaccaccaaaagaagaaccgactcat
ttcccagaactgaaatgtgaaaaatcggatgcttattttgtattacgtgatggggcaagt
ggtgtgtttatgtccgctcataattttccaaaatcgcgtgaaacccgcgcaccgaaagtg
gctgaattagcattatatcgtgatcgtttgccagaaaaattacgttatttagctgatgca
ccacaacatgatcccgaaggtaatgatgctattgtgcgttttagccgtaaagaaaaacgt
caatacgttacttctgaaaagaatggtaaagcaacaaaatggattgtggattaccttggt
aatcagtgggtagagcgaaaaaaataa
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