Pasteurella multocida subsp. multocida 3480: NT08PM_1140
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Entry
NT08PM_1140 CDS
T02057
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03410
Base excision repair
pul03430
Mismatch repair
pul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NT08PM_1140
03430 Mismatch repair
NT08PM_1140
03440 Homologous recombination
NT08PM_1140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_1140
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NT08PM_1140
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NT08PM_1140
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NT08PM_1140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
AFI46260
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Position
complement(1214397..1216118)
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AA seq
573 aa
AA seq
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MNKLIQRRAVPLGEAVSSDPLLDRLYRARQIQHPQQLDRTLAALLHPQQLDGIEAAVTLF
VQAYKQQEKIVIVGDFDADGATSTALAVLALRQLGFTQVAFLIPNRFEQGYGLSIAVAEQ
ALEKDVQLLMTVDNGVSSVEGVAFLKAQGVKVLITDHHLPPTQLPDADAIVNPNLSSCAF
PSKALAGVGVTFYLMLALRAKFRELGIFNQQTQPNFTDLLDLVALGTIADVVPLDQNNRI
LAYQGLARIRAERCRCGIRALAEVANRDMRQLSTSDLGFSLAPRLNAAGRLDNMSVGVEL
LLAEDMTSARALALELDGLNQTRKEIEQGMKLEALEICRQLTALQQTLPFGIALYQADWH
QGVLGIVASRIKDHFYRPVVAFAQEQAGILKGSARSVEGLHLRDALERIHCLYPDMILKF
GGHAMAAGLTIQESRFADFQQAFNQIVGDWLDEGQRQGIVWTDGELDSVQLSLTTAECLK
EAGPWGQAFPEPVFDGEFKILQQRLVGEKHLKMMVEPKQGGPLLDAIAFNVDTRYYPDLS
IKLAKLAYKLDINEFRGNRHLQLLVDYIVPIGT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattaatccaacgtcgtgctgttcccttaggtgaggcggtgtcttctgatccc
ttacttgatcgcctctatcgtgcacggcagattcaacatcctcaacaattagaccgcact
ttagctgcccttttacatccgcaacaactggatggaattgaagcggcggtcactctcttc
gtacaagcctataagcaacaagaaaagattgtaattgtgggcgattttgatgcagatggt
gctactagcaccgccttagctgtactcgcattacgtcaattaggctttacacaagtggcg
tttttaattcctaatcgttttgaacaaggttatggtttgagcatcgcggtagcagagcaa
gctttagaaaaagatgtacagctattaatgaccgtcgataacggggtatcctcagtcgag
ggggtggcttttttaaaagcgcaaggggtcaaggtcttaattactgatcatcatttgcca
cctacacaattgcccgacgcggatgccattgtcaatcctaatttatcaagctgtgctttt
ccatcaaaagccttagccggtgtcggggttactttctatttaatgttagcattgcgcgcg
aaatttcgtgagttggggatatttaatcagcaaactcaaccaaatttcaccgatttattg
gatctcgtcgccttaggcaccattgccgatgtggtacccttagatcaaaataatcgtatt
ttagcctatcaaggtttagcacgtattcgcgcagaacgttgtcgttgcggtattcgtgcg
ttagcagaagtggctaatcgagatatgcgtcagttatctacttcggatttaggtttttct
cttgcaccacgtttaaatgcagcagggcgtttagataatatgtcagtcggtgttgagctt
ttattggctgaagatatgacaagcgcgcgagcattggcacttgaattagatggtttaaat
caaacgcgtaaagaaattgagcaaggcatgaagcttgaggcattagaaatttgccgtcaa
ttgaccgcacttcaacaaacccttccgttcggcattgcgctgtatcaagcggactggcac
cagggggtgttagggattgtggcttcacgtattaaagatcatttttatcgtcctgtggtc
gcatttgcacaagagcaagccggtattctaaaaggctcagcccgttccgttgagggatta
catttacgtgatgcgttagagcgcattcattgtttgtatcctgacatgattttaaagttt
ggtgggcatgcgatggcggcaggcttaaccattcaagaaagccgttttgctgattttcag
caggcatttaatcaaattgttggtgattggcttgatgaaggtcagcgacaaggtattgtg
tggacggatggtgagcttgatagtgttcaattaagtttaacaaccgcggaatgcttgaaa
gaggcgggaccttgggggcaagcgtttccagaacccgtatttgacggcgagtttaaaatt
ttacagcaacgtttagttggcgaaaaacatcttaaaatgatggtcgaaccaaaacagggt
ggaccattgctcgacgccattgcctttaacgtcgatactcgttattatcctgacttgtcg
ataaaattagcaaaattggcatataaattagacattaatgagtttcggggcaatcgtcat
cttcagttattagtggattatattgtgccgatagggacttaa
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