Pasteurella multocida subsp. multocida 3480: NT08PM_1474
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Entry
NT08PM_1474 CDS
T02057
Name
(GenBank) dead/deah box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT08PM_1474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pul03019
]
NT08PM_1474
Enzymes [BR:
pul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NT08PM_1474
Messenger RNA biogenesis [BR:
pul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NT08PM_1474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFI46590
LinkDB
All DBs
Position
complement(1539053..1540366)
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AA seq
437 aa
AA seq
DB search
MLFLTQFFSQIYSFMQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAG
KDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLT
KATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEAD
RMFDLGFIKDIRYLLRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTG
HRIKEELFYPSNQDKMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTG
DVAQKKRLSLLKQFTEGHLDILVATDVAARGLHISDVSHVFNYDLPDDREDYVHRIGRTG
RAGESGVSISFACEEYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGNNNSKNS
ANSNRTFQKKRSLKRNF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgctattcttaacgcaatttttctcacagatttattcttttatgcaaaataattattta
tcgcaacttcgtttttctgatttacccttgcaccatcaggtgcttgctgcgttacaagaa
aaaggctttgattactgtaccccgattcaagcactttctttgccgatgagtttggcggga
aaagatgtggctggacaagcacaaaccggtacaggcaaaacgatggcgtttttaacagcg
acctttcatcatttattaactcaacaaggcgataaagggggacgtcagccacgcgccttg
attcttgcaccaacgcgtgagcttgctgttcaaatcaataatgatgcagcgttacttacg
aaagccacaggattaaaaacaggacttgcctatggcggtgatggctatgagaaacaactc
aaagccattgagcaaggtgttgatattttaattggtaccactggacgtgtgattgactat
gtgaaacaaggcattgtgcgtttagacaaaattcaagtggtcgtgttagatgaagcggat
cggatgtttgatcttggctttattaaagatattcgttatttattgcgtaaatgcccagcg
ccacaacaccgtttgaccatgctattttctgcgaccttatcctataaagtgcgcgaattg
gcgtttgaggatatgaatgatccggaatatgtggaaattgaacccttacaaaaaacggga
catcgtattaaagaagaacttttttatccttcaaaccaagataagatggcgttgttgctc
acgttgttagaagaagaatggccagaacgttgcattatttttgctaacacgaaacatcgt
tgtgaagacatctggggctatctggcggcagatggtcaccgtgtggggctactcactggt
gatgtcgcacagaaaaaacgcctttcactgttgaagcaatttaccgaagggcatttggat
attctcgtggcgaccgatgtggctgcacgtggtttacatatctctgatgtgtcgcatgtg
tttaattatgatttgccagatgatcgcgaggactatgtacaccgtatcggtcgtactggg
cgtgcgggggagagtggagtgtcgattagttttgcgtgtgaagaatatgcgatgaatttg
cccgcaattgaagaatatatctcacatagtattcctgtcagtcaatatgatgtggcggcg
ttattgaccttgccaaaaccgtatcggatcaagcgtggcaataacaacagcaaaaatagt
gcaaattcaaaccgcacttttcagaaaaagcgcagtctaaaacgaaacttttaa
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