Pasteurella multocida subsp. multocida 3480: NT08PM_1741
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Entry
NT08PM_1741 CDS
T02057
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Pathway
pul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT08PM_1741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pul03019
]
NT08PM_1741
03400 DNA repair and recombination proteins [BR:
pul03400
]
NT08PM_1741
Enzymes [BR:
pul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT08PM_1741
Messenger RNA biogenesis [BR:
pul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NT08PM_1741
DNA repair and recombination proteins [BR:
pul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NT08PM_1741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
Motif
Other DBs
NCBI-ProteinID:
AFI46852
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All DBs
Position
1812164..1814062
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AA seq
632 aa
AA seq
DB search
MFSSSLLSKDNKSAVDFHEIPLKQTALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIM
ATGNGKSLCYQIPALCFEGLTLVISPLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQV
QNKLMSGTLKLLYVSPEKVMTTSFFHLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGG
LKSCFPYAPIMALTATADHATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQL
CRFVLGQKGKSGIIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNV
QVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAW
LHKILLEKPESPQRQIEALKLQAIGEFAESQTCRRLVLLNYFGEHQQKPCQNCDICLDPP
KQYDGLIDAQKVMSTIYRIGQRFGAHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE
HWQSVIRQLIHLGFIKQVFDHFNATLQLTENAKPILRGEQPLSLAMPRISSLTSVVAPQR
YAMAQYDKDLFARLRFLRKQIADKENIPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGA
TKFERFAQPFMQIIQQHKKVLTQHEPPLSLES
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgttttctagttctctcctctcaaaagacaataaaagtgcggtggattttcacgaaatt
ccgttaaaacagaccgcacttgacgtgttgcatgctgttttcggttaccaaagtttccgt
aaagggcaagaggaagtcattgatgcgacgttaatgggcaaagatagcctagtaattatg
gcgacggggaatggcaaatccttatgctaccaaattccagccctctgttttgaggggctt
accttggtcatatcaccactgatctcgttaatgaaagatcaagtggaccagctgcttgcg
aatggaattgaagccgattatctcaactctagccaaacctttactgagcaacaacaagta
caaaataaactgatgtctggcaccttaaaattactttatgtgtcgccagaaaaagtgatg
acaaccagctttttccatttgatctcacactgcaaagtgagttttgtggccattgatgag
gctcattgtatttcacaatgggggcatgatttccgtccagaatatacccaacttggtggc
ttaaaaagctgttttccatacgcccccataatggcgctcacggcgactgccgatcatgcc
acacgacaagatattttacgccacttaaacttacaatccccgcatgtgtatattggcagt
tttgatcgcccgaatatccgctatactttagtggaaaaatttaaacccatggagcaactt
tgtcgttttgttttggggcaaaaaggcaaaagtggcattatctactgtaatagccgtagc
aaagtagaacgtattgcagaaagtttgcgcaataaaggggtatccgcacaagcctaccat
gcagggctagaaactgcacaacgtgagcaagttcaacgcgcctttcaacgcgataatgtc
caagttgtagttgcgactatcgcatttggtatggggattaataaatccaatgtgcgcttt
gtcgtgcattttgatttgccacgcagtattgagtcttactatcaagaaacaggacgagcg
ggacgtgatgatttgcctgcggaagcggttttattttatgaacctgcagattacgcttgg
ctacataaaatcctattagagaaacccgaatcaccgcagcgccaaatcgaagcattgaaa
ttacaagcgattggcgaatttgccgaaagtcaaacctgccgacgtttagtcttactcaat
tattttggtgaacaccaacaaaaaccttgtcagaactgtgatatttgccttgatccacct
aaacaatatgatggcttaattgatgcacaaaaagtcatgtcaaccatttaccgcattggt
cagcgttttggtgcgcattatgtgattgccgtcctacgaggtttaagtaatcaaaaaatc
aaagacaatcaacacgagcaattaagcgtttatggcattggtaaagacaaaagcaaagaa
cattggcaatctgttatccgtcaactcattcatttaggttttatcaaacaagtgtttgac
cattttaatgccacattgcaattaaccgaaaatgccaaaccgattttacgcggtgagcaa
cctttatcccttgcgatgccacgtatttcatcacttacctccgtggtagcgcctcaacgc
tacgccatggcacaatatgacaaagacttatttgctcgactccgcttcttacgtaaacaa
atcgcagacaaggaaaatatccctgcttatattgtatttaatgatgcgaccttacaagaa
atggcacaatatcaacccaccaccaaagcggaaatgttagcaatcaatggggtaggggcg
actaagtttgaacgctttgcgcaaccctttatgcagattattcaacaacataaaaaagta
ctcacacaacatgagccgccactctctttagagtcatga
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