| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
pul Pasteurella multocida subsp. multocida 3480
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pul00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NT08PM_2090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pul03021]
NT08PM_2090
03400 DNA repair and recombination proteins [BR:pul03400]
NT08PM_2090
Enzymes [BR:pul01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NT08PM_2090
Transcription machinery [BR:pul03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NT08PM_2090
DNA repair and recombination proteins [BR:pul03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NT08PM_2090
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2166703..2170956)
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| AA seq |
1417 aa
MKDLVKFLKAQSKTSEDFDVIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFESYIVIEPGMTDLDKGQLLTEEQYIDAEDRWGDEFDAK
MGAEAIQALLRDMDLPQECENLREELQETNSETKRKKITKRLKLLEAFIQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYAKLESRGFASTIKAAKKMVEREDAIVWDILADVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDKVNGKGEGMLLQDPREAEKAYRT
GQVELHSRVKVRITEYVKNAVGEFEPQTNLVDTTIGRAILWMIAPKGMPFSLFNQTLGKK
AISKLINESYRRLGMKPSVLFADQIMYTGFAYAARSGSSVGIDDMVIPAKKYEIISAAED
EVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGQPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTEEVLIARNTLLDEKLCDVIDSNSVDSIKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNTGTLR
LANVKFVTNNEGKLVLTSRNTELTIIDAFGRTKEHYKVPYGAILSKGDGQEVTAGETVAN
WDPHTMPVVSEVSGFVKFIDLIDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPAIK
LVDAKGNDILIPGTDVVAQYFLPGKAIVTLDDNAEVHIGEPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPAEGETYEEMIPKWRQLNVFE
GEMVERGDLISDGAETPHDILRLRGVHAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKGIVTKAYDSEFLEGEQVEVARVKIVNRKREAEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRQKKVVMSDEMP
VKLSAADEEEIAAEFTVTAEDATASLAEMLNMADDAE |
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| NT seq |
4254 nt +upstreamnt +downstreamnt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaacaagtgaagattttgatgtg
atcaaaattggtttagcctcaccggacatgatccgttcttggtcatttggtgaagttaaa
aaacctgaaaccattaactaccgcacctttaaaccagagcgtgacggtcttttctgtgca
cgtattttcggaccagtaaaagattacgaatgtttatgtggtaaatacaaacgcttaaaa
caccgtggtgtgatctgtgaaaaatgtggtgtggaagtcactcaaaccaaagtacgtcgt
gagcgtatgggtcacattgaacttgcctcacccgtggcgcacatttggttcttaaaatca
ctgccgtcccgtatcggtttattacttgatatgccattacgtgatatcgaacgcgtttta
tacttcgaatcttatattgtgatcgagccgggaatgacggatctcgataaaggtcagtta
ttaaccgaagaacaatatatcgatgcggaagatcgttggggtgatgaatttgacgcgaaa
atgggggcggaagctatccaagccttattgcgcgatatggatttaccacaagaatgtgaa
aacttacgtgaagaattacaagaaacgaactcagaaaccaaacgtaagaaaatcaccaaa
cgtttaaaactgttagaagcctttattcaatctggtaacaagcctgaatggatggtaatg
accgtattaccggtattaccaccagatttacgtccgttagtaccacttgatggcggtcgt
tttgcgacctcagatttgaacgatctatatcgtcgtgtgattaaccgtaacaaccgttta
aaacgtcttttagacttaatcgcaccagatatcatcgtgcgtaacgaaaaacgtatgtta
caagaatcagtagatgcgttattagataacggtcgtcgtggtcgtgctattactggctct
aaccgtcgtccattaaaatcacttgcggatatgatcaaaggtaaacaaggtcgtttccgt
caaaacctattaggtaaacgtgttgactattcaggtcgttcagtaatcacggtaggacca
tatttgcacctacaccaatgtggtttaccgaaaaaaatggcattggaattattccgtccg
tttatctatgcaaaattagaaagccgtggcttcgcttcaactattaaagccgcgaagaaa
atggttgagcgtgaagatgcgatcgtatgggatatcttagcggacgtaattcgtgagcac
ccaattttattaaaccgtgcgccaacgttgcaccgtttgggtatccaagcctttgaacct
ttattgatcgaaggtaaagcgatccagttacacccacttgtttgtgcggcgttcaacgcg
gacttcgacggtgaccaaatggcggttcacgtgccattgacattagaagcacagttagaa
gcgcgtgcattaatgatgtcaaccaacaacattttatcacctgcaaacggtgagccgatt
atcgttccttcacaagacgtggtattaggtctttactatatgacccgtgataaagtgaac
ggtaaaggtgaaggcatgttgttacaagacccacgtgaagcggaaaaagcgtatcgtacc
ggtcaagtcgaattacattctcgtgtcaaagtgcgtatcacagaatacgtgaaaaatgcg
gtaggcgagtttgagccacaaactaacttagtggatacgaccattggtcgtgcgattctt
tggatgatcgcaccaaaaggaatgccatttagcttgtttaaccaaaccttaggtaaaaaa
gcgatttctaagttaatcaacgagagctatcgtcgcttagggatgaaaccaagcgtcttg
tttgcggaccaaatcatgtacactggttttgcgtatgcggcacgttctggttcttctgta
ggtatcgatgacatggtcattcctgccaagaaatacgaaattatttctgcagcagaagac
gaagtagcggaaatccaagagcagttccaatcaggtttagtgacagcgggcgaacgttat
aacaaagtgatcgatatttgggcggcagcaaacgaacgtgttgctaaagccatgatggaa
aacctatcgactgaagaagtgatcaaccgtgaaggtcaaccagagaaacaagcctctttc
aacagcatctttatgatggcggactcgggtgctcgtggttctgcggcacagattcgtcag
ttagcgggtatgcgtggtttgatggcgcgtccagatggttcgatcattgaaaccccaatt
accgcaaacttccgtgaaggtctaaacgtattacagtactttatttcaacccacggtgcg
cgtaaaggtcttgcggatacggcattaaaaacagcgaactccggttacttaacccgtcgt
ttagtggacgtggcacaagatttagtgatcatcgaagatgactgtggtacacacgaaggt
atcgtgatgaccccattaatcgaaggtggtgatgtgaaagaagcactacgtgatcgtgta
ttaggtcgtgtggtggcagaagacgtgttgaaaccaggcacagaagaagtgttgattgca
cgcaataccttattagatgagaaattgtgtgatgtgatcgacagtaattctgtggatagc
atcaaagtgcgttccgttgtaacctgtaacacagacttcggtgtgtgtgctaaatgttat
ggacgtgatcttgcacgtggtcacttaatcaaccaaggtgaagccgtgggtgttattgcg
gcacaatctatcggtgaaccgggtacacagttaacgatgcgtacgttccatatcggtggt
gcggcatctgcagcagcgaaagaatccagtatccaagtgaaaaacacgggtaccttacgt
ttagccaacgtgaaatttgtcaccaataacgaaggtaagttagtgttaacatcacgtaac
accgaattaaccattattgatgcctttggtcgtacaaaagagcactataaagtgccttac
ggtgcgattttaagcaaaggtgatgggcaagaggtgacagccggtgaaaccgtagcaaac
tgggatccacatactatgccagtggtgtctgaggtaagtggttttgtgaaattcattgac
cttattgacggtttaaccgtgacacgtcaaactgatgagttgactggtttatcttctatc
gtggtacaagatgtgggtgaacgtgcgacagcaggtaaagacttacgtccagctatcaaa
ttagtggatgcgaaaggtaatgatatcttaattccagggacagacgtggtagcacagtac
ttcttaccaggtaaagcgatcgtgaccttagacgacaatgcggaagtccatatcggtgaa
ccattagcacgtattccacaagaatcggtaggaacgaaagatattaccggtggtcttcca
cgcgtggcagacttatttgaagcacgtaaaccgaaagagccagccattttggcggaaatt
tcaggtatcgtgtccttcggtaaagaaaccaaaggtaaacgtcgcttattgatcaccccg
gctgaaggtgaaacttacgaagaaatgattccaaaatggcgtcagctcaacgtatttgaa
ggcgaaatggtggagcgtggtgacttgatctcggatggtgcagaaaccccacatgatatc
ttacgcttacgtggcgttcacgcagtcacagaatatatcgttaacgaagtacaagaagtt
taccgcttacaaggggtaaaaattaacgataaacacatcgaagtgattgttcgtcaaatg
ttacgtaaaggtattgtcacgaaagcttatgactctgaattcttagagggtgagcaagtt
gaagtggcacgcgtgaaaattgtgaaccgtaagcgtgaagcagaaggtaaaccattagtt
gaatttgaacgtgaattgcttggtattaccaaagcgtctcttgcaactgagtcatttatc
tcagcagcgtcgttccaagaaaccacacgtgtgttaaccgaagccgcagtggcaggtaaa
cgtgatgaattacgtggcttgaaagagaacgtaattgtgggtcgtttaatcccagcgggt
accggttttgcttaccaccaaaatcgtcagaagaaagtggtgatgagtgatgaaatgcca
gtgaaattatctgccgcagatgaagaagaaatcgcagcagaatttacggtgactgcagaa
gacgctacagcaagtttagcagaaatgttaaatatggctgatgatgcagaataa |
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