Pseudomonas umsongensis: HGP31_00370
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Entry
HGP31_00370 CDS
T06842
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum03420
Nucleotide excision repair
pum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HGP31_00370 (uvrD)
03430 Mismatch repair
HGP31_00370 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pum03400
]
HGP31_00370 (uvrD)
Enzymes [BR:
pum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HGP31_00370 (uvrD)
DNA repair and recombination proteins [BR:
pum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HGP31_00370 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HGP31_00370 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QJC76806
UniProt:
A0AAE6ZRT0
LinkDB
All DBs
Position
78083..80266
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRQLVANKGVTGRAAGALSAFVELIENLAAKCMEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENSEEDEDLTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPYGGNQ
SMSGSNLFSGSEIPQTGFSLGQTVRHSIFGDGVILNFEGAGAAARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactctctcaacgatgcccaacgccaggccgta
gctgcctccgtgggtcgtcagttggtcctggccggtgctggttccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccccactccatcctg
tcggtgaccttcaccaacaaggctgctgccgagatgcgccatcgcatcgagcagctgatg
ggtatcaacccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcttgctg
cgggcgcactggcaggaagccggcctgagccagaccttccagatactcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgagctcggcctggacgaacagcgctggccc
gcccgtcaggcccaatggttcatcaacgggcagaaagacgaaggtctgcgcccgcaacac
attcaagccagcggcgacctgttcctggcgaccatgcgcagcatttatgaggcctacgag
gccgcgtgcctgcgcgccggtgtcatcgacttctccgaattgctgctgcgcgccctcgac
ctgtggcgcgatcaccctggcttgctggcgcactatcagaagcgcttccggcacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaaa
ggtggcgacagtctgatggtggtcggcgacgacgaccagtcgatctatggctggcgtggc
gcgaaaatcgagaacatctaccagtactccgaagacttcccggacgccgaaaccattcgc
ctggagcagaattaccgctccaccgcaggcatcctcaaggccgccaacgccttgatcgcc
aacaataccgggcgcttgggcaaagagttgtggaccgacggcggcgacggcgaagcgatc
aacctgtacgccgcgttcaacgaacacgacgaagctcgctacgttgtcgaaaccatcgaa
agtgcgctgaaaaccggcttggctcgcagcgatatcgcgattctgtaccgttccaacgcc
caatcgcgcgtgttggaagaagccttgctgcgcgagcgcattccctaccgcatctacggc
ggccagcgcttcttcgaacgtgctgaaatcaagaacgccatggcctacctgcgattgctc
gaaggccgtggcaacgatgccgcgctggaacgggtgatcaacgtgccagcccggggcatc
ggcgagaaaaccgtcgaagcgatccgcgaccacgcccgccacagtgatgtgtcgatgtgg
gaagcgatgcgccagctggtggccaataaaggcgttaccggccgcgcagccggcgcgctg
agcgcgtttgtcgagttgatcgagaaccttgccgccaagtgcatggaaatgccgttgcac
ctgatgacccagaccgtcatcgaacagtcggggctgatcgcctatcacgaagcggaaaaa
ggcgagaagggccaggccagggtagaaaaccttgaggaactggtcagcgcggcgcgcaac
ttcgaaaacagcgaagaggacgaggacctgacgccactggcagccttcctcggtcacgcc
tcgctggaagccggcgatacccaggccgacgaacacgaagacagcattcaattgatgacc
ctgcacagcgccaagggcctggaatttccctatgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgtcttgaggaagaacgtcgcctg
gcctatgtcggcatcactcgggccatgcagaacctggtgatgacctatgccgaaacccga
cgcctctacggcagcgagacctacaacaaggtttcgcggttcgtacgcgaagtacccaag
ggcctgattcaggaagtacggctttccaacagcgtcagccggccgtacggcggcaatcag
tcgatgagtggcagcaatctgttcagcggcagcgagattccgcagaccggcttcagcctg
ggccagactgtacgccactcgatcttcggtgacggcgtgatcctcaacttcgaaggcgcc
ggagcggcggctcgggtacaggttaacttcagcgaaggcagcaagtggctgatgctgggg
tatgccaagctggaagctatttaa
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