KEGG   Pseudomonas umsongensis: HGP31_00870
Entry
HGP31_00870       CDS       T06842                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pum  Pseudomonas umsongensis
Pathway
pum03030  DNA replication
pum03410  Base excision repair
pum03420  Nucleotide excision repair
pum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HGP31_00870 (polA)
   03410 Base excision repair
    HGP31_00870 (polA)
   03420 Nucleotide excision repair
    HGP31_00870 (polA)
   03440 Homologous recombination
    HGP31_00870 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pum03032]
    HGP31_00870 (polA)
   03400 DNA repair and recombination proteins [BR:pum03400]
    HGP31_00870 (polA)
Enzymes [BR:pum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HGP31_00870 (polA)
DNA replication proteins [BR:pum03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HGP31_00870 (polA)
DNA repair and recombination proteins [BR:pum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HGP31_00870 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HGP31_00870 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QJC76906
UniProt: A0AAE6ZSP0
LinkDB
Position
complement(188376..191195)
AA seq 939 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMTGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHREM
AFLSYQLATIKVDVPLDIGLDDLQMGPEDPAKLYELYTLLEFKSWLNDLDRDAKRLELSG
AASEPAPIVDLFSAADAGAEAEVPATTSETRYETVLDQARFDVWLDKLKNAKLFAFDTET
TGIDAQQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVG
QHAKFDMNILANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLALKYLDHTT
VSFQDIAGKGVKQLTFDQIALEQAGPYAAEDADITLRLHQALFDKLSAIPTLASVLTNIE
MPLVPVLARIERQGAFVDAALLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGVIL
YEKLGLPVLKKTAKGQPSTAEEVLAKLAEDDYRLPKVLMEYRSMSKLKSTYTDRLPEQIN
PRTGRIHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPAGYKLLAADYSQI
ELRIMAHLSRDEGLMNAFRNNLDVHTATAAEVFKVELNQVTSDQRRSAKAINFGLIYGMG
AQKLGKDIGVDTKTAKAYIDTYFARYPGVREYMDRTRVQAADQGYVETFFGRRLYLPEIN
SNKPQERAAAERTAINAPMQGTAADIIKKAMVAVDGWLTSSGLDAKVILQVHDELVLEVR
EDLVDQVSNEIRLHMSGAAKLDVPLLVEVGVGNNWDEAH
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcttcttacctgtaccgcgcctttcac
gcgttgccaccgctgaccacgtccaaaggcctgcccaccggcgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagtcccttcgccgtggtattcgat
gccaagggtgggacatttcgcgatgacatgtacgccgaatacaaggccaaccggccgagc
atgcccgacgacatgcgcgtgcagatcgagcccctgcatcaaagcgtgatcgccctgggc
ttcccgctgctgtgcgtagaaggcgtcgaggccgatgacgtgatcggcacgctggcccgc
agcagcgcggcggccgatcgcccggtgatcatctccaccggggacaaggacatggcgcag
ttggtcgacggccacattaccttggtcaataccatgaccggtagcagcatggacgtagag
ggcgtgaaggaaaaattcggcgtcgctcccgagcagatcatcgattatctggcactcatg
ggcgattcgtccgacaacatcccaggcgttccgggcatcggtccaaagaccgcttccggc
ctgctggtgggtgtgaatggtggcttgaccgagctctacgcgcagctcgacatcgtccca
accctgccgatccgcggcgccaagaccctgccggccaaactcgaagagcacagggagatg
gcgttcctctcctaccaattggcgaccatcaaggtcgatgtgccgctggacattggcctc
gacgacttgcagatgggcccggaagatccggccaagctctacgagctctacaccctgctg
gaattcaaaagctggctgaacgatcttgatcgggacgccaagcgtcttgaattgagcggt
gctgcctctgagcctgctccgatagtcgacctgttcagtgccgccgacgccggagctgaa
gctgaagtgccggcgacaacgtcagaaacccgctatgaaaccgtcctcgatcaagcgcga
ttcgacgtttggctggataaactgaaaaacgccaagctgttcgccttcgacaccgaaacc
accggcatcgacgcacagcaggcacaactggtgggcctgtcttttgcggtgcaagccaac
gaagcggcctacatcccgttgacccactcgtacatcggcgtacccgagcaactggatcgc
gacaccgtcctgcgcgccctcaagccgatcctggaagacccgaacaaactcaaggtcggc
cagcacgccaagttcgacatgaacattctcgccaactgcgccatcggtggcgatcaggcc
aacggcatcaccgtgcgcggcgtcgctttcgacaccatgctcgaatcctatgtgctcaat
tccacagccacccgccatgacatggacagcctggcgctgaaatacctggatcacaccacc
gtgagtttccaggacattgccggcaaaggcgtcaagcaactgacgttcgatcaaattgcg
ctggagcaggccgggccttacgccgccgaggacgcggacatcaccctgcgcctgcaccag
gccttgttcgacaagctgtccgccatcccgactctggccagcgtgcttacgaacatcgaa
atgcccctggtgcctgtgctcgcacgtatcgaacgccaaggcgcattcgtagatgccgcc
ctgctgggcgtgcagagcatcgaactgggcgataagatggtggcgctggagcgtgaagcc
ttcgagattgccggagaggaattcaacctgggctcacccaagcagctcggcgtcatcctt
tacgagaaactcgggttgccggtgctgaaaaagaccgccaagggccaaccatcgaccgcc
gaagaagtgctggccaagctggccgaggacgactatcgactgcccaaggtgctgatggaa
taccgctccatgagcaagctcaaaagcacctacaccgaccgtctgccggaacagatcaat
ccacgcaccgggcgcatccacacctcctatcaccaggccgtggcgtccaccgggcgtctc
tcatccagcgacccgaatctgcagaacatcccggtgcgcaccgcggaaggccggcgtatc
cgccaggcctttgtcgccccggccggctacaagctgctggctgccgactattcgcagatt
gaactgcggatcatggcgcacctgtctcgcgatgaaggcctgatgaatgccttccgcaat
aacctggacgtgcacaccgccaccgctgccgaagtgttcaaggtcgagctgaaccaggtc
acctccgaccagcgtcgcagcgccaaggcgatcaacttcggcctgatctatggcatgggt
gcgcaaaaactcggcaaggacatcggcgttgataccaagaccgccaaggcgtacatcgac
acctacttcgcccgttatcccggtgtgcgcgaatacatggatcgcacccgcgtgcaggcc
gcggatcaaggctacgtggaaacgttcttcgggcgacggctgtacttgccggagatcaat
tccaacaagccgcaggagcgtgccgcagccgaacgcacggccatcaacgcgccgatgcaa
ggcacggcagccgacatcatcaagaaagccatggtggccgtggatggatggctgacctcc
tccggcctggacgccaaggtcattctgcaggtccacgatgaattggtactggaagtgcgc
gaggaccttgtcgatcaagtcagcaacgagattcgcctgcacatgagcggtgcggcgaaa
ctggatgtgccattgctggtggaagtcggggtaggcaataactgggatgaggcgcactga

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