Pseudomonas umsongensis: HGP31_01345
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Entry
HGP31_01345 CDS
T06842
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pum
Pseudomonas umsongensis
Pathway
pum00250
Alanine, aspartate and glutamate metabolism
pum00310
Lysine degradation
pum00350
Tyrosine metabolism
pum00650
Butanoate metabolism
pum00760
Nicotinate and nicotinamide metabolism
pum01100
Metabolic pathways
pum01120
Microbial metabolism in diverse environments
Module
pum_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HGP31_01345 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HGP31_01345 (gabD)
00310 Lysine degradation
HGP31_01345 (gabD)
00350 Tyrosine metabolism
HGP31_01345 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HGP31_01345 (gabD)
Enzymes [BR:
pum01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HGP31_01345 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HGP31_01345 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HGP31_01345 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QJC76992
UniProt:
A0AAE7DBS0
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All DBs
Position
303713..305155
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERANKLRRWFELIIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPNGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDG
VYDAFAEKLKVAVAKLKIGNGLEAGTTTGPLIDEKAVAKVQEHIADALSKGATVLAGGKP
MEGNFFEPTILTNVPNNAAVAKEETFGPLAPLFRFKDEADVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcttgggta
gacgcggacaatggtcagacgatcaaggtcaacaacccggcaacgggcgaaattctgggc
accgtgccaaaaatgggcgctgccgaaacccgccgtgccatcgaagccgctgacaaagcg
ctgccggcctggcgtgcactgaccgccaaagaacgtgcgaacaaactgcgtcgctggttc
gagctgatcatcgagaaccaggacgacctggctcgcctgatgaccctggaacaaggcaag
ccactggccgaagccaagggtgaaatcgtttatgccgcttccttcatcgagtggttcgcc
gaagaagccaagcgcatctacggtgacgtgattccgggccaccagccagacaagcgcctg
atcgtgatcaagcagccaatcggcgtgaccgcggccatcaccccgtggaacttccctgcg
gcaatgatcacccgtaaagccggcccggccctggccgccggttgcaccatggtgctcaag
cctgcttcgcaaactccgttctccgccttcgccctggctgaattggcccagcgtgccggt
atccctaacggtgtgttcagcgttgtttccggcagcgccggcgacatcggcagcgagctg
accagcaacccgatcgtgcgcaaattgtccttcaccggttcgaccgaaatcggtcgtcaa
ctgatgtcggaatgcgccaaggacatcaagaaagtgtccctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgaaggcgcgatcatttcc
aaataccgcaacaacggccagacctgcgtctgtgccaaccgcctgtacattcaagacggt
gtctacgacgccttcgccgagaagctgaaagtggccgtggccaagctgaagatcggtaac
ggtctggaagcaggcaccaccactggcccgctgatcgacgaaaaagccgtggccaaggtg
caagagcacatcgccgacgcactgagcaaaggcgcgaccgtactggccggtggcaagccg
atggaaggcaacttcttcgagccaaccatcctgaccaacgttccgaacaacgctgcagtg
gccaaggaagaaaccttcggtccattggctccgctgttccgcttcaaagacgaagccgac
gtgatcgcgatgtccaacgacaccgagttcggactggcctcgtacttctatgctcgcgac
ctgggtcgtgtgttccgtgtggctgaagccctggagtacggcatggtcggcgtcaacacc
ggtctgatctctaacgaagtcgcgccgttcggcggcatcaaggcttccggcctgggccgt
gaaggctccaagtacggcatcgaagattacctggaaatcaaatacctctgcctgggcatc
taa
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